Detailed information NTG0881374

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: RKQ66_RS04250
• Genome accession: NZ_CP134560
• Coordinates: 906834..907892 (-)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain XH1042
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 901834..912892

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RKQ66_RS04225 (RKQ66_04225)	aroK	902104..902673 (-)	570	WP_000643712.1	shikimate kinase AroK	-
RKQ66_RS04230 (RKQ66_04230)	pilQ	902685..904850 (-)	2166	WP_001017033.1	type IV pilus secretin PilQ family protein	Machinery gene
RKQ66_RS04235 (RKQ66_04235)	pilP	904918..905445 (-)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
RKQ66_RS04240 (RKQ66_04240)	pilO	905456..906196 (-)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
RKQ66_RS04245 (RKQ66_04245)	pilN	906193..906834 (-)	642	WP_000201227.1	PilN domain-containing protein	Machinery gene
RKQ66_RS04250 (RKQ66_04250)	pilM	906834..907892 (-)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
RKQ66_RS04255 (RKQ66_04255)	ponA	908055..910610 (+)	2556	WP_000736677.1	penicillin-binding protein PBP1a	-
RKQ66_RS04260 (RKQ66_04260)	-	910628..911452 (-)	825	WP_002019666.1	putative RNA methyltransferase	-
RKQ66_RS04265 (RKQ66_04265)	-	911455..911787 (-)	333	WP_000169594.1	hypothetical protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=881374 RKQ66_RS04250 WP_002014066.1 906834..907892(-) (pilM) [Acinetobacter baumannii strain XH1042]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=881374 RKQ66_RS04250 WP_002014066.1 906834..907892(-) (pilM) [Acinetobacter baumannii strain XH1042]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCCGATCGTCTTG
CGAATCCAAATCGTGTAAATGTACTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGCCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTCTTTGGTGGCAAGCAACTTACGCTTGAAATTCAAAGTCGTTATGGCTTGTCTTTAGAAGAA
GCAAGCCGAGCGAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTAGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423