Detailed information NTG0881289

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: RKQ68_RS13625
• Genome accession: NZ_CP134555
• Coordinates: 2798545..2799663 (+)
• Length: 372 a.a.
• NCBI ID: WP_005135736.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain XH1044
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2793545..2804663

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RKQ68_RS13615 (RKQ68_13625)	-	2796661..2797353 (-)	693	WP_001108509.1	YggS family pyridoxal phosphate-dependent enzyme	-
RKQ68_RS13620 (RKQ68_13630)	pilT	2797480..2798517 (+)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
RKQ68_RS13625 (RKQ68_13635)	pilU	2798545..2799663 (+)	1119	WP_005135736.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
RKQ68_RS13630 (RKQ68_13640)	fur	2799733..2800170 (-)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
RKQ68_RS13635 (RKQ68_13645)	-	2800282..2800680 (+)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
RKQ68_RS13640 (RKQ68_13650)	-	2800735..2801058 (-)	324	WP_000442590.1	RnfH family protein	-
RKQ68_RS13645 (RKQ68_13655)	-	2801058..2802125 (-)	1068	WP_004748097.1	hypothetical protein	-
RKQ68_RS13650 (RKQ68_13660)	-	2802278..2802733 (-)	456	WP_000782976.1	bacteriohemerythrin	-
RKQ68_RS13655 (RKQ68_13665)	-	2802986..2803834 (-)	849	WP_000336554.1	class II glutamine amidotransferase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41890.10 Da
• Isoelectric Point: 6.8288

>NTDB_id=881289 RKQ68_RS13625 WP_005135736.1 2798545..2799663(+) (pilU) [Acinetobacter baumannii strain XH1044]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRKEFADTRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESNRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=881289 RKQ68_RS13625 WP_005135736.1 2798545..2799663(+) (pilU) [Acinetobacter baumannii strain XH1044]
ATGGATTTTAATGACCTACTCAACCTGATGGTTGAAAAGAAATCTTCCGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAACGGGCAAATTGTTCCAATTTCAAAAAACAGCCTTTCTGGGGAAGTAATTGGTCAACTGTTACATTCCA
TTATGAGTGAAAAACAACGCAAAGAATTTGCAGACACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCAGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACCAAACGTGGCATTATTATTTTCGTAGGTGCGACAG
GTACAGGTAAATCTACTTCATTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCCAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTAATCGTCATAGTCAGCTTTACATGGACTTGTCACTTAACTTAAAGGCAATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAGGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCAGATGAAGGTCCTGATCAATTATCAGACGGAAAACAGCATTTAACTTTTGACCGCCAGTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (34-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.397	100	0.766
pilU	Pseudomonas stutzeri DSM 10701	68.75	98.925	0.68
pilU	Vibrio cholerae strain A1552	53.243	99.462	0.53
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	41.908	93.011	0.39