Detailed information NTG0880105

Bioinformatically predicted

Overview

• Name: comEC/celB
• Type: Machinery gene
• Locus tag: RJW56_RS03040
• Genome accession: NZ_CP134472
• Coordinates: 604113..606350 (+)
• Length: 745 a.a.
• NCBI ID: WP_024394380.1
• Uniprot ID: -
• Organism: Streptococcus suis strain 1522228
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 599113..611350

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RJW56_RS03015 (RJW56_03015)	-	599185..600114 (-)	930	WP_009909659.1	ABC transporter substrate-binding protein	-
RJW56_RS03020 (RJW56_03020)	-	600111..600911 (-)	801	WP_013730319.1	ABC transporter ATP-binding protein	-
RJW56_RS03025 (RJW56_03025)	-	601063..602508 (-)	1446	WP_013730320.1	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	-
RJW56_RS03030 (RJW56_03030)	-	602654..603400 (+)	747	WP_014735985.1	1-acyl-sn-glycerol-3-phosphate acyltransferase	-
RJW56_RS03035 (RJW56_03035)	-	603466..604129 (+)	664	Protein_551	helix-hairpin-helix domain-containing protein	-
RJW56_RS03040 (RJW56_03040)	comEC/celB	604113..606350 (+)	2238	WP_024394380.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
RJW56_RS03045 (RJW56_03045)	-	606359..606481 (+)	123	Protein_553	IS982 family transposase	-
RJW56_RS03050 (RJW56_03050)	-	606664..607320 (+)	657	WP_024394381.1	CBS domain-containing protein	-
RJW56_RS03055 (RJW56_03055)	-	607414..608241 (+)	828	WP_023370707.1	hypothetical protein	-
RJW56_RS03060 (RJW56_03060)	-	608247..609518 (+)	1272	WP_002935355.1	toxic anion resistance protein	-
RJW56_RS03065 (RJW56_03065)	-	609555..610421 (-)	867	WP_002935357.1	YitT family protein	-
RJW56_RS03070 (RJW56_03070)	tmk	610596..611234 (+)	639	WP_002935358.1	dTMP kinase	-

Sequence

Protein

• Length: 745 a.a.
• Molecular weight: 84107.06 Da
• Isoelectric Point: 7.6331

>NTDB_id=880105 RJW56_RS03040 WP_024394380.1 604113..606350(+) (comEC/celB) [Streptococcus suis strain 1522228]
MSRLSKLPCQPIHLAVLAVAVYFAVHSFSLLKMGLLSLLLLVFGFRQGKAVFLKTLPLLALCGMFFGYQKVQWERADQSA
PEQVTTVQVIPDTIDINGDSLSFRGRADGQPYQIFYKLTSQEEQAYFQKLADLVQLEVEVEVSLPAGQRNFKGFDYQAYL
KTQGIYRTVKLTAIKKIVPVQSWNVFDWLSTWRRQALVYVKTNFPAPMSHYMTGLLFGELDSEFDQMSDLYSSLGIIHLF
ALSGMQVGFFIDKFRWILLRLGLTKEAVDKLQIPFSLFYAGLTGFSVSVVRSLVQKILGNLGLRKLDNFAVTVFVCLLIL
PRFLLTAGGVLTFTYAFLLTVFDFEDLGQVKKAAVESLSISLGILPVLMTYFYAFQPLSILLTFAFSFVFDVLLLPGLSV
IFLLSPIVKITWVNGFFVFMEKIIVWVADLGLRPWILGKPSGLVLLFLLVSLFLLYDFHRKKNWLLGLSLVLALLFFITK
HPLENEVTVVDIGQGDSIFLRDMRGRTVLIDVGGRVDFAAKEEWQERSSQANAERTLIPYLHSRGVDRIDSLVLTHTDTD
HVGDVLEVAKQVQIGRIYVSPGSLTVPDFVATLKEINVPVHVVKVGDRLPIFDSYLEVLYPDGTGDGGNNDSIVLYGRLL
ETNFLFTGDLEQGELDLIKAYPNLPVDVLKAGHHGSKGSSYPEFLDHIGAKIALISAGENNRYKHPHQETLDRFDSRNIQ
VYRTDQQGAIRFRGWKEWRIETVRR

Nucleotide

• Length: 2238 bp

>NTDB_id=880105 RJW56_RS03040 WP_024394380.1 604113..606350(+) (comEC/celB) [Streptococcus suis strain 1522228]
ATGTCACGGTTGAGTAAGCTCCCCTGCCAGCCCATTCACCTGGCAGTCTTGGCGGTGGCAGTTTACTTTGCAGTCCATTC
TTTTTCCCTCTTGAAAATGGGTCTGCTGAGTTTGTTGTTGCTGGTCTTTGGTTTTCGGCAAGGTAAGGCAGTTTTCCTCA
AAACGCTGCCGCTTCTAGCCCTGTGCGGTATGTTTTTCGGCTACCAAAAGGTCCAATGGGAGCGGGCAGACCAGTCAGCC
CCAGAGCAAGTCACAACTGTGCAGGTCATTCCAGATACCATAGACATCAATGGCGACAGCTTGTCTTTTCGTGGTCGGGC
TGACGGACAACCCTATCAGATTTTCTATAAATTAACCAGTCAGGAGGAGCAGGCTTATTTTCAAAAGCTGGCAGACTTAG
TCCAGCTAGAAGTGGAAGTAGAGGTCAGCTTGCCAGCTGGTCAGCGGAATTTCAAGGGCTTTGACTATCAGGCCTATCTG
AAAACACAGGGCATCTATCGGACAGTCAAGCTAACGGCGATTAAGAAGATTGTCCCTGTCCAGTCTTGGAATGTTTTTGA
CTGGCTGTCAACTTGGCGGAGGCAGGCCTTGGTCTATGTCAAAACCAATTTTCCAGCACCAATGAGTCACTACATGACAG
GACTCTTGTTTGGGGAATTGGATAGTGAGTTTGACCAGATGAGTGACCTCTATTCCAGTTTGGGTATCATTCATCTCTTT
GCCCTGTCTGGTATGCAGGTGGGCTTTTTCATCGACAAGTTTCGTTGGATTTTGTTGCGTCTGGGCTTGACCAAGGAAGC
CGTAGATAAGTTGCAGATTCCCTTTTCACTTTTTTATGCTGGTTTGACAGGCTTTTCTGTGTCGGTGGTGCGGTCCTTGG
TCCAGAAAATTCTGGGTAATCTGGGCTTGCGGAAGCTGGATAACTTTGCGGTGACAGTTTTTGTCTGTCTGCTGATTCTG
CCCCGATTTTTACTGACAGCAGGCGGAGTGCTGACTTTTACCTATGCTTTTTTGCTGACGGTTTTTGATTTTGAGGACTT
GGGGCAGGTCAAAAAGGCTGCGGTGGAGAGTCTCAGTATTTCGCTGGGAATTTTGCCGGTGCTTATGACCTATTTCTATG
CCTTTCAGCCCTTATCTATCCTCCTGACCTTTGCCTTTTCTTTTGTCTTTGATGTCCTACTCTTGCCAGGTTTGTCAGTC
ATTTTTCTCCTGTCGCCAATCGTCAAGATTACTTGGGTTAACGGATTTTTTGTCTTTATGGAAAAAATCATTGTCTGGGT
GGCGGATTTGGGATTGCGACCTTGGATACTGGGCAAGCCGTCTGGGTTGGTCCTCTTGTTCTTGCTGGTCAGCCTTTTCT
TGCTCTACGATTTCCACAGGAAGAAAAACTGGCTCCTAGGACTAAGCCTGGTCCTCGCTCTGCTATTTTTCATCACCAAA
CACCCGCTGGAAAACGAGGTGACGGTGGTGGACATCGGGCAGGGGGACAGCATCTTTTTGCGGGATATGCGGGGGCGGAC
GGTCCTTATTGATGTGGGCGGTCGGGTCGATTTTGCGGCCAAGGAGGAGTGGCAGGAGCGGTCTTCGCAGGCAAATGCAG
AGCGGACTTTGATTCCCTATCTGCACAGTCGAGGTGTGGATAGGATTGATAGTTTGGTCCTGACCCACACCGACACAGAC
CATGTGGGCGATGTGCTGGAAGTAGCTAAGCAGGTGCAAATCGGTCGGATTTACGTGTCGCCAGGAAGCCTGACGGTACC
TGACTTTGTAGCAACCTTGAAAGAAATCAATGTCCCTGTTCATGTGGTGAAAGTGGGCGACCGCTTGCCGATTTTCGATT
CTTATCTGGAAGTCCTTTATCCAGACGGGACAGGCGACGGTGGTAATAATGATTCTATTGTTCTCTACGGTCGCTTGTTG
GAAACCAATTTCCTCTTTACAGGGGACTTGGAGCAGGGGGAACTGGACTTGATAAAAGCCTATCCCAACCTGCCAGTCGA
TGTTCTCAAAGCTGGTCACCATGGTTCAAAAGGCTCTTCCTATCCCGAATTTTTAGACCATATCGGTGCCAAGATTGCCT
TGATATCTGCTGGAGAAAATAACCGCTACAAGCATCCTCATCAAGAAACCTTGGACCGCTTTGACAGTCGGAATATCCAA
GTCTATCGTACCGACCAGCAAGGAGCCATCCGCTTCCGAGGTTGGAAGGAGTGGAGGATTGAAACGGTGAGGAGGTAA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (215-460)

• Metallo-beta-lactamase superfamily (Lactamase_B) (493-698)

• Domain of unknown function (DUF4131) (DUF4131) (30-175)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/celB	Streptococcus mitis SK321	53.701	99.732	0.536
comEC/celB	Streptococcus mitis NCTC 12261	52.925	98.658	0.522
comEC/celB	Streptococcus pneumoniae TIGR4	52.038	98.792	0.514
comEC/celB	Streptococcus pneumoniae Rx1	51.482	99.597	0.513
comEC/celB	Streptococcus pneumoniae D39	51.482	99.597	0.513
comEC/celB	Streptococcus pneumoniae R6	51.482	99.597	0.513
comEC	Lactococcus lactis subsp. cremoris KW2	49.067	100	0.494