Detailed information NTG0878302

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: RG494_RS06300
• Genome accession: NZ_CP134046
• Coordinates: 1379093..1380214 (+)
• Length: 373 a.a.
• NCBI ID: WP_241951379.1
• Uniprot ID: -
• Organism: Pasteurella multocida strain AKS2022-HT5
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1374093..1385214

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RG494_RS06280	napG	1376272..1377024 (+)	753	WP_005718376.1	ferredoxin-type protein NapG	-
RG494_RS06285	napH	1377024..1377899 (+)	876	WP_241951378.1	quinol dehydrogenase ferredoxin subunit NapH	-
RG494_RS06290	-	1377905..1378330 (+)	426	WP_005718380.1	nitrate reductase cytochrome c-type subunit	-
RG494_RS06295	-	1378346..1378939 (+)	594	WP_005718382.1	cytochrome c3 family protein	-
RG494_RS06300	dprA	1379093..1380214 (+)	1122	WP_241951379.1	DNA-processing protein DprA	Machinery gene
RG494_RS06305	lptD	1380322..1382670 (-)	2349	WP_241951380.1	LPS assembly protein LptD	-
RG494_RS06310	-	1382734..1383285 (-)	552	WP_241951381.1	DNA-3-methyladenine glycosylase I	-
RG494_RS06315	tal	1383449..1384402 (+)	954	WP_005718405.1	transaldolase	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 41570.68 Da
• Isoelectric Point: 6.2207

>NTDB_id=878302 RG494_RS06300 WP_241951379.1 1379093..1380214(+) (dprA) [Pasteurella multocida strain AKS2022-HT5]
MSSYLPLLLRLLQIPRLGPLAIQRLLEHVSPAELMEYDTKAFQQMGWTAQQIQRWFTPENRYIDPALAWVNEQQHIVDWF
DPHYPPLLKQTEGAPLVLFVKGEVATLSAQQVAIVGSRHCSRYGEYWANYFATQLAYADIVVTSGLALGIDGFSHQAVVD
SHGKTIAVLGSGLEVIYPKKHRALAEKIIEHQGALVSEFLPFQAPVAENFPRRNRIISGLSLGTLVIEASEHSGSLITAR
YALEQNRDVFALPGQIQHGFSQGCHKLIKQGAILVESIQDILEHLSPYSHCAMPALSHTENAFSQQVTDTSTINTARITP
EHPELYAKIGYMPVSIDVLAQQVNLPIDTLLVQLLTLELQDLIVAENGLYQRK

Nucleotide

• Length: 1122 bp

>NTDB_id=878302 RG494_RS06300 WP_241951379.1 1379093..1380214(+) (dprA) [Pasteurella multocida strain AKS2022-HT5]
ATGTCATCTTATCTGCCTCTTTTATTGCGTTTGTTACAAATTCCGCGCTTGGGTCCGCTGGCGATCCAACGTTTATTGGA
ACATGTCAGCCCAGCAGAATTAATGGAATATGATACAAAAGCCTTTCAACAGATGGGCTGGACGGCACAGCAGATTCAGC
GTTGGTTTACGCCTGAGAACCGTTATATTGATCCCGCGTTAGCCTGGGTAAACGAACAACAACATATTGTGGATTGGTTT
GATCCTCATTATCCTCCCTTGTTAAAGCAAACAGAAGGGGCACCACTTGTCTTGTTTGTGAAAGGGGAAGTGGCTACGCT
ATCTGCACAGCAAGTGGCGATCGTGGGCAGTCGTCATTGTTCGCGTTATGGGGAATACTGGGCAAACTATTTCGCCACGC
AACTGGCTTATGCCGATATTGTGGTGACCAGTGGTTTAGCGTTAGGTATTGATGGTTTCTCTCATCAAGCGGTGGTGGAT
AGCCACGGGAAGACGATTGCAGTATTAGGCAGTGGTTTAGAGGTCATTTACCCGAAAAAACACCGCGCTTTAGCCGAAAA
AATTATTGAACATCAAGGTGCGTTAGTGTCTGAATTTTTACCTTTCCAAGCCCCTGTGGCAGAAAACTTTCCACGTCGTA
ATCGCATTATCAGTGGTTTATCTTTGGGGACATTAGTCATTGAAGCCTCAGAACACAGTGGTTCTTTAATCACTGCCCGC
TATGCTTTAGAGCAAAATCGAGATGTTTTTGCGTTACCGGGGCAGATTCAGCATGGATTTAGCCAAGGTTGTCATAAACT
GATTAAACAGGGGGCAATATTAGTCGAAAGTATTCAGGATATTTTAGAACATCTCTCGCCTTATTCGCATTGTGCCATGC
CAGCGTTGTCTCATACGGAGAACGCCTTTTCTCAACAGGTAACAGACACATCAACCATCAATACTGCGCGGATAACGCCA
GAACATCCGGAATTATATGCCAAAATTGGCTATATGCCCGTCAGTATTGATGTATTAGCCCAACAAGTCAATCTACCTAT
TGATACCTTATTAGTACAGCTTTTAACCTTGGAATTGCAAGACTTGATTGTTGCTGAAAATGGATTATATCAGCGCAAAT
AA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (73-276)

• DprA winged helix domain (DprA_WH) (319-367)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	61.081	99.196	0.606
dprA	Glaesserella parasuis strain SC1401	52.857	93.834	0.496
dprA	Vibrio cholerae strain A1552	45.135	99.196	0.448
dprA	Vibrio campbellii strain DS40M4	44.865	99.196	0.445
dprA	Legionella pneumophila strain ERS1305867	39.623	99.464	0.394