Detailed information NTG0878144

Bioinformatically predicted

Overview

• Name: comYH
• Type: Machinery gene
• Locus tag: RDV49_RS01215
• Genome accession: NZ_CP133988
• Coordinates: 259268..260221 (-)
• Length: 317 a.a.
• NCBI ID: WP_003009772.1
• Uniprot ID: A0AAX4AXY6
• Organism: Streptococcus parasanguinis strain B-1756
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 254268..265221

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RDV49_RS01195 (RDV49_01195)	-	254882..256105 (-)	1224	Protein_230	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	-
RDV49_RS01200 (RDV49_01200)	folP	256106..257056 (-)	951	WP_003009783.1	dihydropteroate synthase	-
RDV49_RS01205 (RDV49_01205)	-	257219..257950 (-)	732	WP_037608245.1	CPBP family intramembrane glutamic endopeptidase	-
RDV49_RS01210 (RDV49_01210)	-	258023..259216 (-)	1194	WP_003009777.1	acetate kinase	-
RDV49_RS01215 (RDV49_01215)	comYH	259268..260221 (-)	954	WP_003009772.1	class I SAM-dependent methyltransferase	Machinery gene
RDV49_RS01220 (RDV49_01220)	comGG	260252..260689 (-)	438	WP_003009770.1	competence type IV pilus minor pilin ComGG	-
RDV49_RS01225 (RDV49_01225)	comGF/cglF	260676..261128 (-)	453	WP_003009767.1	competence type IV pilus minor pilin ComGF	Machinery gene
RDV49_RS01230 (RDV49_01230)	comGE	261118..261405 (-)	288	WP_003004353.1	competence type IV pilus minor pilin ComGE	-
RDV49_RS01235 (RDV49_01235)	comYD	261371..261775 (-)	405	WP_003004513.1	competence type IV pilus minor pilin ComGD	Machinery gene
RDV49_RS01240 (RDV49_01240)	comYC	261765..262082 (-)	318	WP_003009763.1	competence type IV pilus major pilin ComGC	Machinery gene
RDV49_RS01245 (RDV49_01245)	comYB	262079..263110 (-)	1032	WP_182448484.1	competence type IV pilus assembly protein ComGB	Machinery gene
RDV49_RS01250 (RDV49_01250)	comYA	263043..263984 (-)	942	WP_003009757.1	competence type IV pilus ATPase ComGA	Machinery gene
RDV49_RS01255 (RDV49_01255)	-	264072..264461 (-)	390	WP_037608454.1	DUF1033 family protein	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35844.64 Da
• Isoelectric Point: 4.2610

>NTDB_id=878144 RDV49_RS01215 WP_003009772.1 259268..260221(-) (comYH) [Streptococcus parasanguinis strain B-1756]
MNFEKIEQAYTYLLENTQSIQNELSTNFYDALIEQNAMYLDGKTDLDIVKNNSKKLKELGLSKEEWRRAYQFLFMKAAQT
EPLQANHQFTPDAIGFIITFLIDQLAKGDQLDVLEVGSGTGNLAETIVNNSHLTIDYLGLEVDDLLIDLSASIADVMESS
VVFAQGDAVRPQVLKESDLIVSDLPIGYYPDDAIAQRYQVASSKGHTYAHHLMMEQALKYLKPQGVAIFLAPNNLLTSPQ
SDLLKAWLTDKAQILAMLTLPESLFSNPAYAKTIFVLRKQEEESVQPFVYPFTDLQDQDQVVHFMESFQNWLKDSEI

Nucleotide

• Length: 954 bp

>NTDB_id=878144 RDV49_RS01215 WP_003009772.1 259268..260221(-) (comYH) [Streptococcus parasanguinis strain B-1756]
ATGAATTTCGAAAAAATTGAACAAGCCTATACCTATCTATTAGAAAACACTCAAAGTATTCAAAATGAATTGTCGACCAA
CTTTTATGACGCCTTGATTGAACAAAATGCCATGTATTTGGATGGCAAGACAGATCTAGACATTGTTAAAAATAATAGCA
AAAAATTAAAAGAACTAGGTTTAAGTAAGGAAGAATGGCGCAGAGCCTACCAATTCCTTTTTATGAAAGCTGCTCAGACA
GAGCCTTTACAAGCGAATCACCAGTTCACACCAGATGCGATTGGTTTTATCATTACATTTTTGATTGATCAGTTGGCCAA
AGGCGACCAACTGGATGTCTTAGAAGTGGGAAGTGGAACCGGAAATCTCGCTGAGACCATTGTCAACAATAGCCACCTCA
CGATTGATTACTTAGGATTGGAAGTAGATGATCTCTTGATTGACCTATCTGCTAGTATCGCAGACGTGATGGAATCCAGT
GTTGTCTTTGCACAAGGCGATGCGGTTCGCCCACAAGTTTTGAAAGAAAGTGACTTGATCGTCAGTGATCTTCCAATTGG
TTATTATCCAGATGATGCGATTGCACAGCGCTATCAGGTAGCGAGCTCCAAAGGCCATACCTATGCCCATCACCTCATGA
TGGAACAGGCTCTGAAATACCTGAAACCTCAAGGAGTAGCCATCTTTTTAGCTCCAAACAACCTCTTGACGAGCCCTCAG
AGTGATCTGTTGAAAGCTTGGCTAACAGACAAAGCCCAAATTCTTGCCATGCTGACCTTGCCAGAATCTCTTTTTTCAAA
TCCAGCCTATGCTAAGACGATTTTCGTCCTACGAAAACAAGAAGAAGAGTCTGTTCAGCCCTTTGTCTATCCTTTTACCG
ATCTCCAGGATCAAGACCAGGTGGTTCACTTTATGGAAAGTTTCCAAAACTGGTTAAAGGATAGTGAAATTTGA

Domains

Predicted by InterproScan.

• N-6 DNA Methylase (N6_Mtase) (68-286)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYH	Streptococcus mutans UA159	62.54	99.369	0.621
comYH	Streptococcus mutans UA140	62.54	99.369	0.621