Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | PszF2a_RS03645 | Genome accession | NZ_AP024722 |
| Coordinates | 777709..778200 (+) | Length | 163 a.a. |
| NCBI ID | WP_003281797.1 | Uniprot ID | A0A210XTT8 |
| Organism | Stutzerimonas stutzeri strain F2a | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 772709..783200
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PszF2a_RS03635 (PszF2a_07100) | uvrA | 773201..776038 (-) | 2838 | WP_221292963.1 | excinuclease ABC subunit UvrA | - |
| PszF2a_RS03640 (PszF2a_07110) | - | 776169..777536 (+) | 1368 | WP_014595782.1 | MFS transporter | - |
| PszF2a_RS03645 (PszF2a_07120) | ssb | 777709..778200 (+) | 492 | WP_003281797.1 | single-stranded DNA-binding protein | Machinery gene |
| PszF2a_RS03650 (PszF2a_07130) | - | 778211..779095 (+) | 885 | WP_017244908.1 | sugar nucleotide-binding protein | - |
| PszF2a_RS03655 (PszF2a_07140) | - | 779088..780017 (+) | 930 | WP_045159138.1 | NAD-dependent epimerase/dehydratase family protein | - |
| PszF2a_RS03660 (PszF2a_07150) | - | 780088..780774 (-) | 687 | WP_014595784.1 | OmpW/AlkL family protein | - |
| PszF2a_RS03665 (PszF2a_07160) | - | 780959..781744 (+) | 786 | WP_045159139.1 | DUF3450 domain-containing protein | - |
| PszF2a_RS03670 (PszF2a_07170) | - | 781741..783087 (+) | 1347 | WP_221292964.1 | MotA/TolQ/ExbB proton channel family protein | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 18314.38 Da Isoelectric Point: 5.9492
>NTDB_id=87686 PszF2a_RS03645 WP_003281797.1 777709..778200(+) (ssb) [Stutzerimonas stutzeri strain F2a]
MARGVNKVILIGNVGGDPETRYMPNGNAVTNITLATTDSWKDKQTGQLQERTEWHRVVLFGKVAEIAGEYLRKGSQCYIE
GRLQTREWEKDGVKRYTTEIVVDMNGTMQLLGGRGGSSDDAPRQPRPQREPQQAPRQQAQPQQPAARQQPAPDYDSFDDD
IPF
MARGVNKVILIGNVGGDPETRYMPNGNAVTNITLATTDSWKDKQTGQLQERTEWHRVVLFGKVAEIAGEYLRKGSQCYIE
GRLQTREWEKDGVKRYTTEIVVDMNGTMQLLGGRGGSSDDAPRQPRPQREPQQAPRQQAQPQQPAARQQPAPDYDSFDDD
IPF
Nucleotide
Download Length: 492 bp
>NTDB_id=87686 PszF2a_RS03645 WP_003281797.1 777709..778200(+) (ssb) [Stutzerimonas stutzeri strain F2a]
ATGGCCAGAGGGGTGAACAAAGTCATCTTGATCGGCAATGTCGGCGGCGACCCGGAAACCCGCTACATGCCCAATGGCAA
TGCGGTGACCAACATCACGCTGGCAACCACCGACAGCTGGAAGGACAAGCAGACCGGTCAGCTTCAGGAGCGCACCGAGT
GGCACCGTGTGGTGCTCTTCGGCAAGGTCGCCGAGATCGCCGGCGAGTACCTGCGCAAGGGTTCGCAGTGCTACATCGAA
GGCCGCCTGCAGACTCGCGAGTGGGAAAAGGATGGCGTCAAGCGCTACACCACCGAAATCGTCGTCGACATGAATGGCAC
CATGCAGCTGCTCGGCGGCCGTGGCGGCAGTTCCGATGACGCGCCACGTCAGCCGCGCCCGCAGCGCGAGCCGCAACAGG
CTCCGCGTCAGCAGGCTCAGCCGCAGCAGCCGGCCGCACGGCAGCAGCCAGCGCCGGACTATGACAGCTTCGATGACGAC
ATCCCCTTTTAG
ATGGCCAGAGGGGTGAACAAAGTCATCTTGATCGGCAATGTCGGCGGCGACCCGGAAACCCGCTACATGCCCAATGGCAA
TGCGGTGACCAACATCACGCTGGCAACCACCGACAGCTGGAAGGACAAGCAGACCGGTCAGCTTCAGGAGCGCACCGAGT
GGCACCGTGTGGTGCTCTTCGGCAAGGTCGCCGAGATCGCCGGCGAGTACCTGCGCAAGGGTTCGCAGTGCTACATCGAA
GGCCGCCTGCAGACTCGCGAGTGGGAAAAGGATGGCGTCAAGCGCTACACCACCGAAATCGTCGTCGACATGAATGGCAC
CATGCAGCTGCTCGGCGGCCGTGGCGGCAGTTCCGATGACGCGCCACGTCAGCCGCGCCCGCAGCGCGAGCCGCAACAGG
CTCCGCGTCAGCAGGCTCAGCCGCAGCAGCCGGCCGCACGGCAGCAGCCAGCGCCGGACTATGACAGCTTCGATGACGAC
ATCCCCTTTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
56.571 |
100 |
0.607 |
| ssb | Neisseria gonorrhoeae MS11 |
47.727 |
100 |
0.515 |
| ssb | Glaesserella parasuis strain SC1401 |
45.355 |
100 |
0.509 |
| ssb | Neisseria meningitidis MC58 |
46.591 |
100 |
0.503 |