Detailed information NTG0875948

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: RGU80_RS01450
• Genome accession: NZ_CP133706
• Coordinates: 310163..311221 (+)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain CRAb2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 305163..316221

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RGU80_RS01435 (RGU80_01440)	-	306268..306600 (+)	333	WP_000169594.1	hypothetical protein	-
RGU80_RS01440 (RGU80_01445)	-	306603..307427 (+)	825	WP_002019666.1	putative RNA methyltransferase	-
RGU80_RS01445 (RGU80_01450)	ponA	307445..310000 (-)	2556	WP_000736677.1	penicillin-binding protein PBP1a	-
RGU80_RS01450 (RGU80_01455)	pilM	310163..311221 (+)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
RGU80_RS01455 (RGU80_01460)	pilN	311221..311862 (+)	642	WP_000201227.1	PilN domain-containing protein	Machinery gene
RGU80_RS01460 (RGU80_01465)	pilO	311859..312599 (+)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
RGU80_RS01465 (RGU80_01470)	pilP	312610..313137 (+)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
RGU80_RS01470 (RGU80_01475)	pilQ	313205..315370 (+)	2166	WP_001017033.1	type IV pilus secretin PilQ family protein	Machinery gene
RGU80_RS01475 (RGU80_01480)	aroK	315382..315951 (+)	570	WP_000643712.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=875948 RGU80_RS01450 WP_002014066.1 310163..311221(+) (pilM) [Acinetobacter baumannii strain CRAb2]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=875948 RGU80_RS01450 WP_002014066.1 310163..311221(+) (pilM) [Acinetobacter baumannii strain CRAb2]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCCGATCGTCTTG
CGAATCCAAATCGTGTAAATGTACTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGCCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTCTTTGGTGGCAAGCAACTTACGCTTGAAATTCAAAGTCGTTATGGCTTGTCTTTAGAAGAA
GCAAGCCGAGCGAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTAGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423