Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | TOL5_RS01050 | Genome accession | NZ_AP024708 |
| Coordinates | 230133..230717 (+) | Length | 194 a.a. |
| NCBI ID | WP_004826134.1 | Uniprot ID | A0A0A8TNZ3 |
| Organism | Acinetobacter sp. Tol 5 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 225133..235717
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| TOL5_RS01035 (TOL5_02000) | tenA | 226586..227257 (-) | 672 | WP_121774551.1 | thiaminase II | - |
| TOL5_RS01040 (TOL5_02010) | - | 227495..228577 (+) | 1083 | WP_171428649.1 | DUF475 domain-containing protein | - |
| TOL5_RS01045 (TOL5_02020) | - | 228717..230081 (+) | 1365 | WP_121774549.1 | MFS transporter | - |
| TOL5_RS01050 (TOL5_02030) | ssb | 230133..230717 (+) | 585 | WP_004826134.1 | single-stranded DNA-binding protein | Machinery gene |
| TOL5_RS01055 (TOL5_02040) | - | 230865..231770 (-) | 906 | WP_121774548.1 | DMT family transporter | - |
| TOL5_RS01060 (TOL5_02050) | - | 231953..232828 (+) | 876 | WP_121774547.1 | AraC family transcriptional regulator | - |
| TOL5_RS01065 (TOL5_02060) | - | 232998..233333 (-) | 336 | WP_004826157.1 | hypothetical protein | - |
| TOL5_RS01070 (TOL5_02070) | ahpC | 233534..234097 (+) | 564 | WP_005035218.1 | alkyl hydroperoxide reductase subunit C | - |
| TOL5_RS01075 (TOL5_02080) | - | 234314..235678 (-) | 1365 | WP_121774546.1 | OprD family outer membrane porin | - |
Sequence
Protein
Download Length: 194 a.a. Molecular weight: 21381.08 Da Isoelectric Point: 6.4839
>NTDB_id=87576 TOL5_RS01050 WP_004826134.1 230133..230717(+) (ssb) [Acinetobacter sp. Tol 5]
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSESWTDKNSGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGEQMQMLDNNRQQGEAGENGGYNQPRFNNNQQGGFNNNQGGGYNQGNQGGYGNAAPQGG
YGNGGNNVNQGFQSPKPQQAPATAPADLDDDLPF
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSESWTDKNSGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGEQMQMLDNNRQQGEAGENGGYNQPRFNNNQQGGFNNNQGGGYNQGNQGGYGNAAPQGG
YGNGGNNVNQGFQSPKPQQAPATAPADLDDDLPF
Nucleotide
Download Length: 585 bp
>NTDB_id=87576 TOL5_RS01050 WP_004826134.1 230133..230717(+) (ssb) [Acinetobacter sp. Tol 5]
ATGCGTGGTGTAAATAAAGTTATTTTAGTTGGTACTTTGGGTCGTGATCCTGAGACGAAAACATTCCCAAATGGGGGGTC
TCTCACTCAATTTTCAATAGCGACCAGTGAATCTTGGACAGATAAAAATTCCGGAGAAAGAAAAGAACAAACGGAATGGC
ATCGTATTGTGTTGCATAACCGCTTAGGTGAAATTGCACAGCAATATTTACGTAAAGGCTCGAAAGTTTATATTGAGGGT
TCTTTACGTACACGTCAGTGGACAGATCAAAATGGTCAAGAACGCTACACAACGGAAATCCGTGGTGAGCAAATGCAGAT
GTTGGATAACAACCGTCAGCAAGGTGAAGCAGGTGAAAACGGGGGCTATAACCAACCACGTTTCAATAACAATCAACAAG
GTGGTTTTAATAACAACCAAGGTGGTGGTTATAATCAAGGCAACCAAGGTGGCTATGGTAATGCAGCTCCACAAGGTGGT
TATGGCAATGGTGGAAACAATGTTAATCAGGGTTTCCAGTCGCCTAAACCACAACAAGCGCCTGCAACTGCTCCAGCAGA
TTTAGATGATGATCTGCCGTTCTAG
ATGCGTGGTGTAAATAAAGTTATTTTAGTTGGTACTTTGGGTCGTGATCCTGAGACGAAAACATTCCCAAATGGGGGGTC
TCTCACTCAATTTTCAATAGCGACCAGTGAATCTTGGACAGATAAAAATTCCGGAGAAAGAAAAGAACAAACGGAATGGC
ATCGTATTGTGTTGCATAACCGCTTAGGTGAAATTGCACAGCAATATTTACGTAAAGGCTCGAAAGTTTATATTGAGGGT
TCTTTACGTACACGTCAGTGGACAGATCAAAATGGTCAAGAACGCTACACAACGGAAATCCGTGGTGAGCAAATGCAGAT
GTTGGATAACAACCGTCAGCAAGGTGAAGCAGGTGAAAACGGGGGCTATAACCAACCACGTTTCAATAACAATCAACAAG
GTGGTTTTAATAACAACCAAGGTGGTGGTTATAATCAAGGCAACCAAGGTGGCTATGGTAATGCAGCTCCACAAGGTGGT
TATGGCAATGGTGGAAACAATGTTAATCAGGGTTTCCAGTCGCCTAAACCACAACAAGCGCCTGCAACTGCTCCAGCAGA
TTTAGATGATGATCTGCCGTTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
50.98 |
100 |
0.536 |
| ssb | Vibrio cholerae strain A1552 |
44.776 |
100 |
0.464 |
| ssb | Neisseria gonorrhoeae MS11 |
38.889 |
100 |
0.397 |
| ssb | Neisseria meningitidis MC58 |
38.889 |
100 |
0.397 |