Detailed information NTG0875432

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: RFF20_RS08655
• Genome accession: NZ_CP133639
• Coordinates: 1857753..1858874 (+)
• Length: 373 a.a.
• NCBI ID: WP_083003809.1
• Uniprot ID: -
• Organism: Pasteurella multocida strain Past6
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1852753..1863874

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RFF20_RS08635 (RFF20_08635)	napG	1854932..1855684 (+)	753	WP_083003818.1	ferredoxin-type protein NapG	-
RFF20_RS08640 (RFF20_08640)	napH	1855684..1856559 (+)	876	WP_083003815.1	quinol dehydrogenase ferredoxin subunit NapH	-
RFF20_RS08645 (RFF20_08645)	-	1856565..1856990 (+)	426	WP_005718380.1	nitrate reductase cytochrome c-type subunit	-
RFF20_RS08650 (RFF20_08650)	-	1857006..1857599 (+)	594	WP_005718382.1	cytochrome c3 family protein	-
RFF20_RS08655 (RFF20_08655)	dprA	1857753..1858874 (+)	1122	WP_083003809.1	DNA-processing protein DprA	Machinery gene
RFF20_RS08660 (RFF20_08660)	lptD	1858980..1861343 (-)	2364	WP_126417754.1	LPS assembly protein LptD	-
RFF20_RS08665 (RFF20_08665)	-	1861395..1861946 (-)	552	WP_324005887.1	DNA-3-methyladenine glycosylase I	-
RFF20_RS08670 (RFF20_08670)	tal	1862104..1863057 (+)	954	WP_083003802.1	transaldolase	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 41544.66 Da
• Isoelectric Point: 6.2628

>NTDB_id=875432 RFF20_RS08655 WP_083003809.1 1857753..1858874(+) (dprA) [Pasteurella multocida strain Past6]
MSSYLPLLLRLLQIPRLGPLAIQRLLEHVSPAELMEYDTKAFQQMGWTAQQIQRWFTPENRYIDPALAWVNEQQHIVDWF
DPHYPPLLKQTEGAPLVLFVKGEVATLSARQVAIVGSRHCSRYGEYWANYFATQLAYADIVVTSGLALGIDGFSHQAVVD
SHGKTIAVLGSGLEVIYPKKHRGLAEKIIEHQGALVSEFLPFQAPVAENFPRRNRIISGLSLGTLVIEASEHSGSLITAR
YALEQNRDVFALPGQIQHGCSQGCHKLIKQGAILVESIQDILEHLSPYSHCAMPTLPRTENAFSQQVTDTSTISTARITP
EHPELYAQIGYMPVSIDVLAQQANLPIDTLLVQLLTLELQDLIVAENGLYQRK

Nucleotide

• Length: 1122 bp

>NTDB_id=875432 RFF20_RS08655 WP_083003809.1 1857753..1858874(+) (dprA) [Pasteurella multocida strain Past6]
ATGTCATCTTATCTGCCTCTTTTATTGCGTTTGTTACAAATTCCGCGTTTGGGTCCGCTGGCGATCCAACGTTTATTGGA
ACATGTCAGCCCAGCAGAATTAATGGAATATGATACAAAAGCATTTCAACAGATGGGCTGGACGGCACAGCAGATTCAGC
GTTGGTTTACGCCTGAGAACCGTTATATTGATCCCGCGTTAGCCTGGGTAAACGAACAACAACATATTGTGGATTGGTTT
GATCCTCATTATCCTCCCTTGTTAAAGCAAACAGAAGGGGCACCACTTGTCTTGTTTGTGAAAGGGGAAGTCGCTACGCT
ATCAGCACGGCAAGTGGCGATCGTGGGCAGTCGTCATTGTTCGCGTTATGGGGAATACTGGGCAAACTATTTCGCCACCC
AACTGGCTTATGCTGATATTGTGGTGACCAGTGGTTTAGCGTTAGGTATTGATGGTTTCTCACATCAAGCGGTGGTGGAT
AGCCACGGGAAGACGATTGCAGTATTAGGCAGTGGTTTAGAGGTCATTTATCCGAAAAAACACCGTGGTTTAGCCGAAAA
AATTATTGAACATCAAGGTGCGTTAGTGTCTGAATTTTTACCTTTCCAAGCCCCTGTGGCAGAAAACTTTCCACGTCGTA
ATCGCATTATTAGTGGTTTATCTTTGGGGACATTAGTGATTGAAGCCTCAGAACACAGTGGTTCTTTAATTACTGCCCGC
TATGCTTTAGAGCAAAATCGAGATGTCTTTGCGTTACCGGGGCAGATTCAACATGGATGTAGCCAAGGTTGTCATAAACT
GATTAAACAGGGGGCAATATTAGTCGAAAGTATTCAGGATATTTTAGAACATCTTTCGCCTTATTCGCATTGTGCCATGC
CAACGTTGCCTCGTACGGAGAACGCCTTTTCTCAGCAGGTAACAGACACATCAACCATCAGTACTGCGCGGATAACGCCA
GAACATCCGGAATTATATGCCCAAATTGGCTATATGCCTGTCAGTATTGATGTATTAGCCCAACAAGCCAATCTACCTAT
TGATACCTTATTAGTACAGCTTTTAACCTTGGAATTACAAGACTTGATTGTTGCTGAAAATGGATTATATCAGCGCAAAT
AA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (73-276)

• DprA winged helix domain (DprA_WH) (319-367)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	61.081	99.196	0.606
dprA	Glaesserella parasuis strain SC1401	52.857	93.834	0.496
dprA	Vibrio cholerae strain A1552	44.92	100	0.45
dprA	Vibrio campbellii strain DS40M4	45.135	99.196	0.448
dprA	Legionella pneumophila strain ERS1305867	39.623	99.464	0.394