Detailed information NTG0875409

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: RFF38_RS09930
• Genome accession: NZ_CP133638
• Coordinates: 2069493..2070614 (+)
• Length: 373 a.a.
• NCBI ID: WP_249984895.1
• Uniprot ID: -
• Organism: Pasteurella multocida strain Past9
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 2064493..2075614

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RFF38_RS09910 (RFF38_09910)	napG	2066672..2067424 (+)	753	WP_096743495.1	ferredoxin-type protein NapG	-
RFF38_RS09915 (RFF38_09915)	napH	2067424..2068299 (+)	876	WP_083003815.1	quinol dehydrogenase ferredoxin subunit NapH	-
RFF38_RS09920 (RFF38_09920)	-	2068305..2068730 (+)	426	WP_005718380.1	nitrate reductase cytochrome c-type subunit	-
RFF38_RS09925 (RFF38_09925)	-	2068746..2069339 (+)	594	WP_005718382.1	cytochrome c3 family protein	-
RFF38_RS09930 (RFF38_09930)	dprA	2069493..2070614 (+)	1122	WP_249984895.1	DNA-processing protein DprA	Machinery gene
RFF38_RS09935 (RFF38_09935)	lptD	2070720..2073083 (-)	2364	WP_126417754.1	LPS assembly protein LptD	-
RFF38_RS09940 (RFF38_09940)	-	2073135..2073686 (-)	552	WP_005724442.1	DNA-3-methyladenine glycosylase I	-
RFF38_RS09945 (RFF38_09945)	tal	2073844..2074797 (+)	954	WP_083003802.1	transaldolase	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 41571.68 Da
• Isoelectric Point: 6.2628

>NTDB_id=875409 RFF38_RS09930 WP_249984895.1 2069493..2070614(+) (dprA) [Pasteurella multocida strain Past9]
MSSYLPLLLRLLQIPRLGPLAIQRLLEHVSPAELMEYDTKAFQQMGWTAQQIQRWFTPENRYIDPALAWVNEQQHIVDWF
DPHYPPLLKQTEGAPLVLFVKGEVATLSARQVAIVGSRHCSRYGEYWANYFATQLAYADIVVTSGLALGIDGFSHQAVVD
SHGKTIAVLGSGLEVIYPKKHRGLAEKIIEHQGALVSEFLPFQAPVAENFPRRNRIISGLSLGTLVIEASEHSGSLITAR
YALEQNRDVFALPGQIQHGCSQGCHKLIKQGAILVESIQDILEHLSPYSHCAMPTLPRTENAFSQQVTDTSTINTARITP
EHPELYAQIGYMPVSIDVLAQQANLPIDTLLVQLLTLELQDLIVAENGLYQRK

Nucleotide

• Length: 1122 bp

>NTDB_id=875409 RFF38_RS09930 WP_249984895.1 2069493..2070614(+) (dprA) [Pasteurella multocida strain Past9]
ATGTCATCTTATCTGCCTCTTTTATTGCGTTTGTTACAAATTCCGCGTTTGGGTCCGCTGGCGATCCAACGTTTATTGGA
ACATGTCAGCCCAGCAGAATTAATGGAATATGATACAAAAGCATTTCAACAGATGGGCTGGACGGCACAGCAGATTCAGC
GTTGGTTTACGCCTGAGAACCGTTATATTGATCCCGCGTTAGCCTGGGTAAACGAACAACAACATATTGTGGATTGGTTT
GATCCTCATTATCCTCCCTTGTTAAAGCAAACAGAAGGGGCACCACTTGTCTTGTTTGTGAAAGGGGAAGTCGCTACGCT
ATCAGCACGGCAAGTGGCGATCGTGGGCAGTCGTCATTGTTCGCGTTATGGGGAATACTGGGCAAACTATTTCGCCACCC
AACTGGCTTATGCTGATATTGTGGTGACCAGTGGCTTAGCGTTAGGTATTGATGGTTTCTCACATCAAGCGGTGGTGGAT
AGCCACGGGAAGACGATTGCAGTATTAGGCAGTGGTTTAGAGGTCATTTATCCGAAAAAACACCGTGGTTTAGCCGAAAA
AATTATTGAACATCAAGGTGCGTTAGTGTCTGAATTTTTACCTTTCCAAGCCCCTGTGGCAGAAAACTTTCCACGTCGTA
ATCGCATTATTAGTGGTTTATCTTTGGGGACATTAGTGATTGAAGCCTCAGAACACAGTGGTTCTTTAATTACTGCCCGT
TATGCTTTAGAGCAAAATCGAGATGTTTTTGCGTTACCGGGGCAGATTCAACATGGATGTAGCCAAGGTTGTCATAAACT
GATTAAACAGGGGGCAATATTAGTCGAAAGTATTCAGGATATTTTAGAACATCTTTCGCCTTATTCGCATTGTGCCATGC
CAACGTTGCCTCGTACGGAGAACGCCTTTTCTCAGCAGGTAACAGACACATCAACCATCAATACTGCACGGATAACGCCA
GAACATCCGGAATTATATGCCCAAATTGGCTATATGCCTGTCAGTATTGATGTATTAGCCCAACAAGCCAATCTACCTAT
TGATACCTTATTAGTACAGCTTTTAACCTTGGAATTACAAGACTTGATTGTTGCTGAAAATGGATTATATCAGCGCAAAT
AA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (73-276)

• DprA winged helix domain (DprA_WH) (319-367)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	61.081	99.196	0.606
dprA	Glaesserella parasuis strain SC1401	53.143	93.834	0.499
dprA	Vibrio cholerae strain A1552	44.92	100	0.45
dprA	Vibrio campbellii strain DS40M4	45.135	99.196	0.448
dprA	Legionella pneumophila strain ERS1305867	39.623	99.464	0.394