Detailed information NTG0875363

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: RFF39_RS09210
• Genome accession: NZ_CP133634
• Coordinates: 1960298..1961419 (+)
• Length: 373 a.a.
• NCBI ID: WP_310850855.1
• Uniprot ID: -
• Organism: Pasteurella multocida strain Past33
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1955298..1966419

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RFF39_RS09190 (RFF39_09190)	napG	1957478..1958230 (+)	753	WP_005718376.1	ferredoxin-type protein NapG	-
RFF39_RS09195 (RFF39_09195)	napH	1958230..1959105 (+)	876	WP_250191607.1	quinol dehydrogenase ferredoxin subunit NapH	-
RFF39_RS09200 (RFF39_09200)	-	1959111..1959536 (+)	426	WP_005718380.1	nitrate reductase cytochrome c-type subunit	-
RFF39_RS09205 (RFF39_09205)	-	1959552..1960145 (+)	594	WP_005718382.1	cytochrome c3 family protein	-
RFF39_RS09210 (RFF39_09210)	dprA	1960298..1961419 (+)	1122	WP_310850855.1	DNA-processing protein DprA	Machinery gene
RFF39_RS09215 (RFF39_09215)	lptD	1961525..1963873 (-)	2349	WP_005724441.1	LPS assembly protein LptD	-
RFF39_RS09220 (RFF39_09220)	-	1963937..1964488 (-)	552	WP_010907245.1	DNA-3-methyladenine glycosylase I	-
RFF39_RS09225 (RFF39_09225)	tal	1964646..1965599 (+)	954	WP_005724444.1	transaldolase	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 41673.84 Da
• Isoelectric Point: 6.2635

>NTDB_id=875363 RFF39_RS09210 WP_310850855.1 1960298..1961419(+) (dprA) [Pasteurella multocida strain Past33]
MSSYLPLLLRLLQIPRLGSMAIQRLLEHVSPAELMEYDTKAFQQIGWTTQQIQRWFTPENRYIDPTLAWVNEQQHIVDWF
DPHYPPLLKQTEGAPLVLFVKGEVATLSAQQVAIVGSRHCSRYGEYWANYFATQLAYADIVVTSGLALGIDGFSHQAVVD
IHGKTIAVLGSGLEVIYPKKHRGLAEKIIEHQGALVSEFLPFQPPVAENFPRRNRIISGLSLGTLVIEASEHSGSLITAR
YALEQNRDVFALPGQIQHGFSQGCHKLIKQGAILVESIQDILEHLSPYSHCAMPALPRTENAFSQQVTDTSTINTARITP
EHPELYAKIGYMPVSIDVLAQQVNLPVDTLLVQLLTLELQDLIVAENGLYQRK

Nucleotide

• Length: 1122 bp

>NTDB_id=875363 RFF39_RS09210 WP_310850855.1 1960298..1961419(+) (dprA) [Pasteurella multocida strain Past33]
ATGTCATCTTATCTGCCTCTTTTATTACGTTTGTTACAAATTCCGCGTTTGGGTTCGATGGCGATCCAGCGTTTATTGGA
GCACGTCAGTCCAGCGGAATTAATGGAATATGATACAAAAGCCTTTCAACAGATAGGCTGGACGACACAGCAGATTCAGC
GTTGGTTTACGCCTGAGAACCGTTATATTGATCCCACGTTAGCCTGGGTAAACGAACAACAACATATTGTGGATTGGTTT
GATCCTCATTATCCTCCCTTGTTAAAGCAAACAGAAGGGGCTCCACTTGTCTTGTTTGTGAAAGGGGAAGTGGCTACGCT
ATCTGCACAGCAAGTGGCGATCGTGGGCAGTCGTCATTGTTCGCGTTATGGGGAATACTGGGCAAACTATTTCGCCACCC
AACTGGCTTATGCCGATATTGTGGTGACCAGTGGTTTAGCGTTAGGTATTGATGGTTTCTCACATCAAGCGGTGGTGGAT
ATCCACGGGAAGACGATTGCAGTATTAGGCAGTGGTTTAGAGGTCATTTATCCGAAAAAACACCGAGGTTTAGCCGAAAA
AATTATTGAACATCAAGGTGCGTTAGTGTCTGAATTTTTACCTTTCCAGCCCCCTGTGGCAGAAAATTTTCCACGTCGTA
ATCGCATTATTAGTGGTTTGTCTTTGGGGACATTAGTCATTGAAGCCTCAGAACACAGTGGTTCTTTAATTACTGCCCGC
TATGCTTTAGAGCAAAATCGAGATGTTTTTGCGTTACCGGGGCAGATTCAGCATGGATTTAGCCAAGGTTGTCATAAACT
GATAAAACAGGGGGCAATATTAGTCGAAAGTATTCAGGATATTTTAGAACATCTCTCGCCTTATTCGCATTGTGCCATGC
CAGCGTTGCCTCGTACGGAGAACGCCTTTTCTCAACAGGTAACAGACACATCAACCATCAATACTGCGCGGATAACGCCA
GAACATCCGGAATTATATGCCAAAATTGGCTATATGCCCGTCAGTATTGATGTATTAGCCCAACAAGTCAATTTACCTGT
TGATACCTTATTAGTACAGCTTTTAACTTTGGAATTGCAAGACTTGATTGTTGCTGAAAATGGATTATATCAGCGTAAAT
AA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (73-276)

• DprA winged helix domain (DprA_WH) (319-367)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	60.27	99.196	0.598
dprA	Glaesserella parasuis strain SC1401	52.857	93.834	0.496
dprA	Vibrio cholerae strain A1552	45.722	100	0.458
dprA	Vibrio campbellii strain DS40M4	45.135	99.196	0.448
dprA	Legionella pneumophila strain ERS1305867	39.353	99.464	0.391