Detailed information NTG0875341

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: RFF25_RS08955
• Genome accession: NZ_CP133633
• Coordinates: 1910646..1911767 (+)
• Length: 373 a.a.
• NCBI ID: WP_083003809.1
• Uniprot ID: -
• Organism: Pasteurella multocida strain Pm1618
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1905646..1916767

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RFF25_RS08935 (RFF25_08930)	napG	1907825..1908577 (+)	753	WP_096743495.1	ferredoxin-type protein NapG	-
RFF25_RS08940 (RFF25_08935)	napH	1908577..1909452 (+)	876	WP_104884196.1	quinol dehydrogenase ferredoxin subunit NapH	-
RFF25_RS08945 (RFF25_08940)	-	1909458..1909883 (+)	426	WP_005718380.1	nitrate reductase cytochrome c-type subunit	-
RFF25_RS08950 (RFF25_08945)	-	1909899..1910492 (+)	594	WP_250190824.1	cytochrome c3 family protein	-
RFF25_RS08955 (RFF25_08950)	dprA	1910646..1911767 (+)	1122	WP_083003809.1	DNA-processing protein DprA	Machinery gene
RFF25_RS08960 (RFF25_08955)	lptD	1911873..1914236 (-)	2364	WP_250190825.1	LPS assembly protein LptD	-
RFF25_RS08965 (RFF25_08960)	-	1914288..1914839 (-)	552	WP_005724442.1	DNA-3-methyladenine glycosylase I	-
RFF25_RS08970 (RFF25_08965)	tal	1914997..1915950 (+)	954	WP_083003802.1	transaldolase	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 41544.66 Da
• Isoelectric Point: 6.2628

>NTDB_id=875341 RFF25_RS08955 WP_083003809.1 1910646..1911767(+) (dprA) [Pasteurella multocida strain Pm1618]
MSSYLPLLLRLLQIPRLGPLAIQRLLEHVSPAELMEYDTKAFQQMGWTAQQIQRWFTPENRYIDPALAWVNEQQHIVDWF
DPHYPPLLKQTEGAPLVLFVKGEVATLSARQVAIVGSRHCSRYGEYWANYFATQLAYADIVVTSGLALGIDGFSHQAVVD
SHGKTIAVLGSGLEVIYPKKHRGLAEKIIEHQGALVSEFLPFQAPVAENFPRRNRIISGLSLGTLVIEASEHSGSLITAR
YALEQNRDVFALPGQIQHGCSQGCHKLIKQGAILVESIQDILEHLSPYSHCAMPTLPRTENAFSQQVTDTSTISTARITP
EHPELYAQIGYMPVSIDVLAQQANLPIDTLLVQLLTLELQDLIVAENGLYQRK

Nucleotide

• Length: 1122 bp

>NTDB_id=875341 RFF25_RS08955 WP_083003809.1 1910646..1911767(+) (dprA) [Pasteurella multocida strain Pm1618]
ATGTCATCTTATCTGCCTCTTTTATTGCGTTTGTTACAAATTCCGCGCTTGGGTCCGCTGGCGATCCAACGTTTATTGGA
ACATGTCAGCCCAGCAGAATTAATGGAATATGATACAAAAGCATTTCAACAGATGGGCTGGACGGCACAGCAGATTCAGC
GTTGGTTTACGCCTGAGAACCGTTATATTGATCCCGCGTTAGCCTGGGTAAACGAACAACAACATATTGTGGATTGGTTT
GATCCTCATTATCCTCCCTTGTTAAAGCAAACAGAAGGGGCACCACTTGTCTTGTTTGTGAAAGGGGAAGTCGCTACGCT
ATCAGCACGGCAAGTGGCGATCGTGGGCAGTCGTCATTGTTCGCGTTATGGGGAATACTGGGCAAACTATTTCGCCACCC
AACTGGCTTATGCTGATATTGTGGTGACCAGTGGCTTAGCGTTAGGTATTGATGGTTTCTCACATCAAGCGGTGGTGGAT
AGCCACGGGAAGACGATTGCAGTATTAGGCAGTGGTTTAGAGGTCATTTATCCGAAAAAACACCGTGGTTTAGCCGAAAA
AATTATTGAACATCAAGGTGCGTTAGTGTCTGAATTTTTACCTTTCCAAGCCCCTGTGGCAGAAAACTTTCCACGTCGTA
ATCGCATTATTAGTGGTTTATCTTTGGGGACATTAGTGATTGAAGCCTCAGAACACAGTGGTTCTTTAATTACTGCCCGC
TATGCTTTAGAGCAAAATCGAGATGTCTTTGCGTTACCGGGGCAGATTCAACATGGATGTAGCCAAGGTTGTCATAAACT
GATTAAACAGGGGGCAATATTAGTCGAAAGTATTCAGGATATTTTAGAACATCTTTCGCCTTATTCGCATTGTGCCATGC
CAACGTTGCCTCGTACGGAGAACGCCTTTTCTCAGCAGGTAACAGACACATCAACCATCAGTACTGCGCGGATAACGCCA
GAACATCCGGAATTATATGCCCAAATTGGCTATATGCCTGTCAGTATTGATGTATTAGCCCAACAAGCCAATCTACCTAT
TGATACCTTATTAGTACAGCTTTTAACCTTGGAATTACAAGACTTGATTGTTGCTGAAAATGGATTATATCAGCGCAAAT
AA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (73-276)

• DprA winged helix domain (DprA_WH) (319-367)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	61.081	99.196	0.606
dprA	Glaesserella parasuis strain SC1401	52.857	93.834	0.496
dprA	Vibrio cholerae strain A1552	44.92	100	0.45
dprA	Vibrio campbellii strain DS40M4	45.135	99.196	0.448
dprA	Legionella pneumophila strain ERS1305867	39.623	99.464	0.394