Detailed information NTG0875318

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: RFF30_RS08790
• Genome accession: NZ_CP133632
• Coordinates: 1907530..1908651 (+)
• Length: 373 a.a.
• NCBI ID: WP_324007049.1
• Uniprot ID: -
• Organism: Pasteurella multocida strain Pm1621
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1902530..1913651

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RFF30_RS08770 (RFF30_08770)	napG	1904709..1905461 (+)	753	WP_005718376.1	ferredoxin-type protein NapG	-
RFF30_RS08775 (RFF30_08775)	napH	1905461..1906336 (+)	876	WP_005752145.1	quinol dehydrogenase ferredoxin subunit NapH	-
RFF30_RS08780 (RFF30_08780)	-	1906342..1906767 (+)	426	WP_005718380.1	nitrate reductase cytochrome c-type subunit	-
RFF30_RS08785 (RFF30_08785)	-	1906783..1907376 (+)	594	WP_005718382.1	cytochrome c3 family protein	-
RFF30_RS08790 (RFF30_08790)	dprA	1907530..1908651 (+)	1122	WP_324007049.1	DNA-processing protein DprA	Machinery gene
RFF30_RS08795 (RFF30_08795)	lptD	1908757..1911105 (-)	2349	WP_324007050.1	LPS assembly protein LptD	-
RFF30_RS08800 (RFF30_08800)	-	1911169..1911720 (-)	552	WP_005724442.1	DNA-3-methyladenine glycosylase I	-
RFF30_RS08805 (RFF30_08805)	tal	1911878..1912831 (+)	954	WP_059245857.1	transaldolase	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 41671.91 Da
• Isoelectric Point: 6.2635

>NTDB_id=875318 RFF30_RS08790 WP_324007049.1 1907530..1908651(+) (dprA) [Pasteurella multocida strain Pm1621]
MSSYLPLLLRLLQIPRLGSLAIQRLLEHVSLAELMEYDTKAFQQMGWTAQQIQRWFTPENRYIDPALAWVNEQQHIVDWF
DPHYPPLLKQTEGAPLVLFVKGEVATLSAQQVAIVGSRHCSRYGEYWANYFATQLAYADIVVTSGLALGIDGFSHQAVVD
IHGKTIAVLGSGLEVIYPKKHRGLAEKIIEHQGALVSEFLPFQPPVAENFPRRNRIISGLSLGTLVIEASEHSGSLITAR
YALEQNRDVFALPGQIQHGFSQGCHKLIKQGAILVESIQDILEHLSPYSHCAMPALPRTENAFSQQVTDTSTINTVRITP
EHPELYAKIGYMPVSIDVLAQQVNLPVDTLLVQLLTLELQDLIIAENGLYQRK

Nucleotide

• Length: 1122 bp

>NTDB_id=875318 RFF30_RS08790 WP_324007049.1 1907530..1908651(+) (dprA) [Pasteurella multocida strain Pm1621]
ATGTCATCTTATCTGCCTCTTTTATTACGTTTGTTACAAATTCCGCGTTTGGGTTCGCTGGCGATCCAGCGTTTATTGGA
GCACGTCAGTCTAGCGGAATTAATGGAATATGATACAAAAGCCTTTCAACAGATGGGCTGGACGGCACAGCAGATTCAGC
GTTGGTTTACGCCTGAGAACCGTTATATTGATCCCGCGTTAGCCTGGGTAAACGAACAACAACATATTGTGGATTGGTTT
GATCCTCATTATCCTCCCTTGTTAAAGCAAACAGAAGGGGCACCACTTGTCTTGTTTGTGAAAGGGGAAGTGGCTACGCT
ATCTGCACAGCAAGTGGCGATCGTGGGCAGTCGTCATTGTTCACGTTATGGGGAATACTGGGCAAACTATTTCGCCACCC
AACTGGCTTATGCCGATATTGTGGTGACCAGTGGTTTAGCGTTAGGTATTGATGGTTTCTCACATCAAGCGGTAGTGGAT
ATCCACGGGAAGACGATTGCAGTATTAGGCAGTGGTTTAGAGGTCATTTATCCGAAAAAACACCGAGGTTTAGCCGAAAA
AATTATTGAACATCAAGGTGCGTTAGTGTCTGAATTTTTACCTTTCCAACCCCCTGTGGCAGAAAATTTTCCACGTCGTA
ATCGCATTATTAGTGGTTTATCTTTGGGGACATTAGTCATTGAAGCCTCAGAACACAGTGGTTCTTTAATTACTGCCCGC
TATGCTTTAGAGCAAAATCGAGATGTTTTTGCGTTACCGGGGCAGATTCAGCATGGATTTAGCCAAGGTTGTCATAAACT
GATTAAACAGGGGGCAATATTAGTCGAAAGTATTCAGGATATTTTAGAACATCTCTCGCCTTATTCGCATTGTGCCATGC
CAGCGTTGCCTCGTACGGAGAACGCCTTTTCTCAACAAGTAACAGACACATCAACCATCAATACTGTGCGGATAACCCCA
GAACATCCGGAATTATATGCCAAAATTGGCTATATGCCCGTCAGTATTGATGTATTAGCCCAACAAGTCAATTTACCTGT
TGATACCTTATTAGTACAGCTTTTAACTTTGGAATTGCAAGACTTGATTATTGCTGAAAATGGATTATATCAGCGCAAAT
AA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (73-276)

• DprA winged helix domain (DprA_WH) (319-364)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	61.622	99.196	0.611
dprA	Glaesserella parasuis strain SC1401	53.429	93.834	0.501
dprA	Vibrio cholerae strain A1552	44.92	100	0.45
dprA	Vibrio campbellii strain DS40M4	44.959	98.391	0.442
dprA	Legionella pneumophila strain ERS1305867	39.892	99.464	0.397