Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   RA164_RS03530 Genome accession   NZ_CP132911
Coordinates   864709..865065 (+) Length   118 a.a.
NCBI ID   WP_412731061.1    Uniprot ID   -
Organism   Dyella aluminiiresistens strain A6     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 859709..870065
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RA164_RS03505 - 860486..861412 (-) 927 WP_329742593.1 aspartate carbamoyltransferase catalytic subunit -
  RA164_RS03510 ruvX 861409..861867 (-) 459 WP_329742594.1 Holliday junction resolvase RuvX -
  RA164_RS03515 - 861878..862447 (-) 570 WP_329742595.1 YqgE/AlgH family protein -
  RA164_RS03520 - 862532..863398 (-) 867 WP_329742596.1 energy transducer TonB -
  RA164_RS03525 gshB 863395..864357 (-) 963 WP_329742597.1 glutathione synthase -
  RA164_RS03530 pilG 864709..865065 (+) 357 WP_412731061.1 twitching motility response regulator PilG Regulator
  RA164_RS03535 - 865098..865469 (+) 372 WP_329742599.1 response regulator -
  RA164_RS03540 - 865477..866019 (+) 543 WP_329742600.1 chemotaxis protein CheW -
  RA164_RS03545 - 866137..868167 (+) 2031 WP_329742601.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 118 a.a.        Molecular weight: 13164.37 Da        Isoelectric Point: 8.5103

>NTDB_id=870590 RA164_RS03530 WP_412731061.1 864709..865065(+) (pilG) [Dyella aluminiiresistens strain A6]
MVIDDSKTIRRTAETLLKKEGCDVLTAVDGFEALAKISDQKPVIIFVDIMMPRLDGYQTCALIKNNPQFRATPVIMLSSK
DGLFDKARGRIVGAEQYLTKPFTRDELLGAIHRHVSTV

Nucleotide


Download         Length: 357 bp        

>NTDB_id=870590 RA164_RS03530 WP_412731061.1 864709..865065(+) (pilG) [Dyella aluminiiresistens strain A6]
ATGGTGATCGATGACTCCAAGACCATCCGTCGTACGGCGGAGACCTTGCTGAAAAAAGAAGGTTGCGACGTGCTGACCGC
CGTCGACGGGTTCGAGGCGCTGGCGAAGATTTCCGACCAGAAGCCAGTGATCATCTTCGTTGACATCATGATGCCGCGAC
TCGACGGCTATCAGACCTGCGCGCTGATCAAGAACAATCCGCAGTTCCGCGCGACGCCGGTCATCATGCTCAGCTCTAAG
GACGGCCTGTTCGACAAGGCGCGCGGACGCATCGTGGGCGCCGAGCAGTATCTCACCAAGCCCTTCACTCGGGATGAGTT
GCTTGGTGCCATCCATCGCCATGTCAGCACGGTTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(1-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.359

99.153

0.737
  vicR Streptococcus mutans UA159

41.739

97.458

0.407
  pilH Synechocystis sp. PCC 6803

40.708

95.763

0.39
  chiS Vibrio cholerae strain A1552

37.069

98.305

0.364