Detailed information NTG0868736

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: RAM23_RS02510
• Genome accession: NZ_CP132374
• Coordinates: 591969..593147 (+)
• Length: 392 a.a.
• NCBI ID: WP_100125049.1
• Uniprot ID: -
• Organism: Snodgrassella alvi strain wkB339
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 586969..598147

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RAM23_RS02490 (RAM23_02485)	-	587949..589178 (+)	1230	WP_100125703.1	PilT/PilU family type 4a pilus ATPase	-
RAM23_RS02495 (RAM23_02490)	murU	589311..590012 (+)	702	WP_100125687.1	N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU	-
RAM23_RS02500 (RAM23_02495)	ruvC	590143..590694 (+)	552	WP_078475011.1	crossover junction endodeoxyribonuclease RuvC	-
RAM23_RS02505 (RAM23_02500)	-	590799..591584 (-)	786	WP_100125686.1	DUF2071 domain-containing protein	-
RAM23_RS02510 (RAM23_02505)	dprA	591969..593147 (+)	1179	WP_100125049.1	DNA-processing protein DprA	Machinery gene
RAM23_RS02515 (RAM23_02510)	-	593159..593617 (+)	459	WP_025329887.1	DUF494 family protein	-
RAM23_RS02520 (RAM23_02515)	topA	593759..596053 (+)	2295	WP_100125048.1	type I DNA topoisomerase	-
RAM23_RS02525 (RAM23_02520)	rsmD	596132..596704 (+)	573	WP_100125047.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
RAM23_RS02530 (RAM23_02525)	-	596796..597050 (+)	255	WP_037392355.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 42127.10 Da
• Isoelectric Point: 6.4947

>NTDB_id=868736 RAM23_RS02510 WP_100125049.1 591969..593147(+) (dprA) [Snodgrassella alvi strain wkB339]
MDTQERLAWIELALTPFVGAETFLRIIKYFGSAQNALSASAAEISPFCQRQISKYWHSDVAKQATEAAIEWEQAHTDARL
LLLADNDFPAMLTKGLTPPPLLFVRGDSQCLHQPALSIVGSRHATPQAMRITHDFAAALARKGVTIVSGMASGADTAAHQ
GALQAIGTTVAVWGTGIDRVYPARNKNLATQIAAHGCIISEFPLGTRPSPGNFPRRNRLIAALSQGTLVVEAATESGSLI
TARLAGEMGREVMAIPGSIDNPLSKGCHALIKQGAKLVENLEDILQECPRLLQKKDLQSYSNRPHLQTDDISKSSTNTDS
SEDSLSVHSPDCILNPMEQQVLDGLGYGIMHPDMLVTALGMAATDVYAHLVTLELGGWITTLPGGCYQRIKS

Nucleotide

• Length: 1179 bp

>NTDB_id=868736 RAM23_RS02510 WP_100125049.1 591969..593147(+) (dprA) [Snodgrassella alvi strain wkB339]
ATGGATACGCAAGAACGCTTAGCCTGGATTGAATTGGCATTAACTCCGTTTGTAGGTGCTGAAACTTTTCTTCGCATAAT
TAAATATTTTGGTTCCGCGCAAAATGCTCTTAGTGCATCGGCTGCTGAAATATCGCCTTTTTGTCAACGGCAAATCAGTA
AGTATTGGCATAGTGATGTAGCAAAGCAGGCAACTGAAGCAGCTATAGAATGGGAGCAAGCGCATACTGATGCACGTTTA
TTACTACTAGCAGATAATGATTTTCCGGCAATGCTAACCAAGGGTTTAACACCGCCTCCATTATTGTTTGTTCGTGGTGA
TAGTCAGTGTTTGCATCAACCTGCTTTATCAATTGTTGGTAGTCGGCATGCAACACCACAAGCCATGCGCATTACACATG
ATTTTGCAGCTGCACTGGCACGGAAAGGTGTAACAATTGTTTCAGGCATGGCTAGTGGCGCAGATACAGCAGCACATCAG
GGTGCTTTGCAGGCAATCGGTACAACAGTGGCAGTTTGGGGTACAGGTATTGACAGAGTATATCCGGCACGCAACAAAAA
TTTAGCCACACAAATTGCAGCTCATGGCTGTATTATTTCTGAATTTCCCTTGGGTACTCGTCCTTCGCCGGGAAATTTTC
CGCGACGTAACCGCTTGATTGCTGCACTTAGTCAGGGTACGCTGGTAGTTGAAGCCGCAACTGAATCGGGCTCATTGATT
ACTGCAAGATTGGCTGGCGAAATGGGGCGGGAAGTTATGGCGATACCGGGTTCTATTGATAACCCTTTAAGTAAAGGCTG
CCACGCATTAATCAAACAGGGTGCCAAATTAGTAGAAAATCTGGAAGATATTTTGCAGGAATGTCCACGCCTCTTGCAAA
AAAAAGATTTGCAATCATATAGCAATCGTCCTCATCTGCAAACTGATGATATAAGTAAATCATCTACAAATACTGATAGT
TCAGAAGATTCATTATCAGTTCATTCACCAGATTGTATACTTAACCCGATGGAGCAGCAGGTGCTGGACGGACTGGGTTA
CGGCATAATGCATCCGGATATGTTAGTTACAGCACTTGGCATGGCTGCTACAGATGTGTATGCTCATCTCGTGACATTGG
AGCTTGGTGGCTGGATTACCACTCTGCCAGGCGGCTGTTATCAACGCATTAAATCTTGA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (76-279)

• DprA winged helix domain (DprA_WH) (334-385)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Neisseria meningitidis strain C311	58.543	100	0.594
dprA	Neisseria meningitidis MC58	58.543	100	0.594
dprA	Neisseria gonorrhoeae strain FA1090	57.037	100	0.589
dprA	Neisseria gonorrhoeae MS11	56.79	100	0.587