Detailed information NTG0868204

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: WHP79_RS06380
• Genome accession: NZ_CP148221
• Coordinates: 1248818..1249777 (+)
• Length: 319 a.a.
• NCBI ID: WP_070309048.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain Z1323CCJ0052
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1243818..1254777

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WHP79_RS06355 (WHP79_06355)	-	1244378..1245577 (-)	1200	WP_032591570.1	glycosyltransferase family 8 protein	-
WHP79_RS06360 (WHP79_06360)	-	1245570..1246721 (-)	1152	WP_032591573.1	glycosyltransferase family 8 protein	-
WHP79_RS06365 (WHP79_06365)	-	1246734..1247276 (-)	543	WP_338878155.1	FkbM family methyltransferase	-
WHP79_RS06370 (WHP79_06370)	-	1247270..1247881 (-)	612	WP_338878101.1	hypothetical protein	-
WHP79_RS06375 (WHP79_06375)	waaV	1247944..1248759 (-)	816	WP_060806422.1	glycosyltransferase family 2 protein	-
WHP79_RS06380 (WHP79_06380)	waaF	1248818..1249777 (+)	960	WP_070309048.1	lipopolysaccharide heptosyltransferase II	Regulator
WHP79_RS06385 (WHP79_06385)	gmhA	1249758..1250318 (-)	561	WP_020247045.1	D-sedoheptulose 7-phosphate isomerase	-
WHP79_RS06390 (WHP79_06390)	rfaE1	1250315..1251700 (-)	1386	WP_060806424.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
WHP79_RS06395 (WHP79_06395)	rfaD	1251693..1252646 (-)	954	WP_002859254.1	ADP-glyceromanno-heptose 6-epimerase	-
WHP79_RS06400 (WHP79_06400)	gmhB	1252647..1253208 (-)	562	Protein_1246	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
WHP79_RS06405 (WHP79_06405)	-	1253289..1253591 (+)	303	WP_002852762.1	cytochrome c	-
WHP79_RS06410 (WHP79_06410)	ccoS	1253614..1253820 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36789.44 Da
• Isoelectric Point: 10.4034

>NTDB_id=868204 WHP79_RS06380 WP_070309048.1 1248818..1249777(+) (waaF) [Campylobacter jejuni strain Z1323CCJ0052]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQVLSLRKKLGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLHIKAHLKDLKLPFKLKFQSLLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCDEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GSMHISAVYKVKTVAIFGPTKFTQTSPWQNENARWVHLNLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNPHL

Nucleotide

• Length: 960 bp

>NTDB_id=868204 WHP79_RS06380 WP_070309048.1 1248818..1249777(+) (waaF) [Campylobacter jejuni strain Z1323CCJ0052]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCCCGCTACAAACAAGTCCTATCTTTACGCAAAAAACTTGGCAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTCACATAAAAGCTCACCTTAAAGACTTAA
AACTTCCCTTTAAGCTAAAATTTCAAAGCCTTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGTCAAAGTCATGAAATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTCTGCGATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAACCTTTGCAATAAAACTACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGTGATCTTTTCATCACAAATGACAGT
GGCTCTATGCACATAAGTGCGGTTTACAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACCTCACC
TTGGCAAAATGAAAATGCAAGATGGGTGCATTTAAATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTCAAAGGGTTATAGAAGAAGCTAGAAATTTACTTAAAAACCCTCATCTATAA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	91.85	100	0.919