Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   Q7574_RS17460 Genome accession   NZ_CP131867
Coordinates   3659931..3661064 (+) Length   377 a.a.
NCBI ID   WP_151283627.1    Uniprot ID   -
Organism   Acinetobacter pittii strain 2012N08-034     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 3654931..3666064
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7574_RS17435 (Q7574_17505) - 3655226..3655432 (-) 207 WP_049838257.1 hypothetical protein -
  Q7574_RS17440 (Q7574_17510) - 3655486..3657561 (-) 2076 WP_151283514.1 TonB-dependent copper receptor -
  Q7574_RS17445 (Q7574_17515) - 3657634..3658059 (-) 426 WP_069035867.1 DUF2946 family protein -
  Q7574_RS17450 (Q7574_17520) def 3658103..3658633 (-) 531 WP_002114101.1 peptide deformylase -
  Q7574_RS17455 (Q7574_17525) tsaP 3658756..3659910 (+) 1155 WP_057067739.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  Q7574_RS17460 (Q7574_17530) dprA 3659931..3661064 (+) 1134 WP_151283627.1 DNA-processing protein DprA Machinery gene
  Q7574_RS17465 (Q7574_17535) yrdC 3661116..3661685 (+) 570 WP_005072030.1 Sua5/YciO/YrdC/YwlC family protein -
  Q7574_RS17470 (Q7574_17540) - 3662078..3662998 (-) 921 WP_342063420.1 DMT family transporter -
  Q7574_RS17475 (Q7574_17545) - 3663102..3663755 (-) 654 WP_081410689.1 TetR/AcrR family transcriptional regulator -
  Q7574_RS17480 (Q7574_17550) nepI 3663891..3665105 (+) 1215 WP_069121952.1 MFS transporter -
  Q7574_RS17485 (Q7574_17555) yeaM 3665127..3665891 (+) 765 WP_068929847.1 helix-turn-helix transcriptional regulator -

Sequence


Protein


Download         Length: 377 a.a.        Molecular weight: 41834.38 Da        Isoelectric Point: 6.6296

>NTDB_id=865652 Q7574_RS17460 WP_151283627.1 3659931..3661064(+) (dprA) [Acinetobacter pittii strain 2012N08-034]
MLTQLSSHHYHTLKVWYLVQHSLVSFKKIVDYFGSCEKAIQPAGLSQWRNLGLHANHLKRVAEFQTTQGQAQFEKLTEQI
QQYTDFILTADDSGYPTQLLPYTDHPPIIFGKGQAQALLQPQIAIVGSRKPSPHGRQVAYDFAYYLSEKGFYVSSGLAYG
IDEAAHQGASAHQRTIAVTGTGLDSTYPAQNKKLAEHILAQNGAIITEFLPGTPPLQQHFPRRNRIVSGLSLGVLVVEAT
LKSGSLITANKAAEQGKTVFAIPGHIYSEFHQGCHQLIREGAILVDHPEQIIEDLALPTQWQSQQQNSTEEAVVSSTPEI
PEHLINLYQSLDWVGQNIDQLVLHHSQPVAELTSSLMELELLGLCMQQSGLYLRCRS

Nucleotide


Download         Length: 1134 bp        

>NTDB_id=865652 Q7574_RS17460 WP_151283627.1 3659931..3661064(+) (dprA) [Acinetobacter pittii strain 2012N08-034]
ATGCTTACTCAACTTTCTTCACACCATTACCACACGCTTAAAGTGTGGTATTTGGTGCAACACTCTTTAGTCAGCTTTAA
AAAAATTGTCGATTATTTTGGTAGCTGTGAAAAGGCGATCCAACCTGCTGGATTATCTCAATGGCGCAATCTCGGGTTAC
ATGCTAATCATTTAAAACGTGTAGCTGAATTTCAAACCACTCAGGGTCAAGCTCAGTTTGAAAAACTAACTGAGCAGATC
CAGCAATATACCGACTTTATTTTAACGGCAGATGACTCAGGCTATCCCACTCAGTTATTACCTTATACAGATCACCCACC
TATCATTTTTGGAAAAGGCCAAGCTCAAGCTTTGTTGCAACCACAAATTGCGATTGTAGGTAGCCGAAAACCAAGCCCAC
ATGGTCGTCAGGTTGCTTATGATTTTGCCTACTACTTAAGTGAAAAAGGTTTTTATGTGAGTAGTGGATTGGCATATGGT
ATTGATGAAGCTGCTCACCAAGGAGCATCAGCACATCAACGTACAATTGCAGTAACAGGAACTGGTTTAGACAGTACCTA
CCCTGCTCAAAATAAAAAACTTGCAGAACATATTTTGGCTCAAAATGGCGCGATTATTACTGAATTTTTGCCTGGAACAC
CCCCATTACAACAGCATTTCCCACGTAGAAACCGAATTGTCAGCGGTTTGAGTTTAGGCGTGTTAGTGGTAGAAGCTACA
TTAAAAAGTGGTTCTCTCATCACTGCGAACAAAGCTGCCGAACAAGGTAAGACTGTATTTGCCATTCCTGGTCATATTTA
CAGTGAGTTTCATCAAGGTTGCCATCAACTTATTCGTGAGGGAGCAATTTTAGTCGATCATCCTGAACAAATTATTGAAG
ACCTTGCTTTACCCACCCAGTGGCAAAGTCAGCAACAAAACTCCACCGAGGAGGCTGTAGTTTCTAGTACTCCAGAAATT
CCTGAGCATTTAATTAACCTTTATCAATCTTTAGACTGGGTTGGACAAAATATTGATCAGCTTGTCTTACATCACTCTCA
GCCTGTTGCAGAACTCACCTCTTCACTGATGGAACTAGAACTACTTGGTTTATGTATGCAACAATCAGGATTGTATTTAC
GTTGTCGTTCTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii D1279779

91.512

100

0.915

  dprA Acinetobacter baumannii strain A118

90.716

100

0.907

  dprA Acinetobacter baylyi ADP1

71.391

100

0.721

  dprA Vibrio cholerae strain A1552

44.144

88.329

0.39