Detailed information NTG0864341

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: Q7620_RS04650
• Genome accession: NZ_CP131713
• Coordinates: 910103..911056 (+)
• Length: 317 a.a.
• NCBI ID: WP_000495896.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 2008C09-276
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 905103..916056

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q7620_RS04625 (Q7620_04620)	rpmG	905846..905995 (+)	150	WP_001810029.1	50S ribosomal protein L33	-
Q7620_RS04630 (Q7620_04625)	secG	906035..906268 (+)	234	WP_000282517.1	preprotein translocase subunit SecG	-
Q7620_RS04635 (Q7620_04630)	rnr	906370..908724 (+)	2355	WP_000654871.1	ribonuclease R	-
Q7620_RS04640 (Q7620_04635)	smpB	908687..909154 (+)	468	WP_001051750.1	SsrA-binding protein SmpB	-
Q7620_RS04645 (Q7620_04640)	tehB	909170..910030 (+)	861	WP_000413762.1	SAM-dependent methyltransferase TehB	-
Q7620_RS04650 (Q7620_04645)	coiA	910103..911056 (+)	954	WP_000495896.1	competence protein CoiA	Machinery gene
Q7620_RS04655 (Q7620_04650)	pepF	911075..912877 (+)	1803	WP_000244124.1	oligoendopeptidase F	Regulator
Q7620_RS04660 (Q7620_04655)	-	912879..913592 (+)	714	WP_001810028.1	O-methyltransferase	-
Q7620_RS04665 (Q7620_04660)	prsA	913659..914600 (+)	942	WP_000727935.1	peptidylprolyl isomerase PrsA	-
Q7620_RS04670 (Q7620_04665)	-	914719..915060 (-)	342	Protein_921	IS3 family transposase	-
Q7620_RS04675 (Q7620_04670)	-	915472..915567 (+)	96	Protein_922	IS630 family transposase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 38243.86 Da
• Isoelectric Point: 8.9865

>NTDB_id=864341 Q7620_RS04650 WP_000495896.1 910103..911056(+) (coiA) [Streptococcus pneumoniae strain 2008C09-276]
MFVARDARGELVNVLEDKLEKQAYTCPACGGQIHLRQGPSVRTHFAHKSLKDCDFFFENESPEHIANKESLYHWLKKETK
VQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGF
YVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQHFYTYYQKNPQNDWQKLYPPAFYQQYFLKNMVE

Nucleotide

• Length: 954 bp

>NTDB_id=864341 Q7620_RS04650 WP_000495896.1 910103..911056(+) (coiA) [Streptococcus pneumoniae strain 2008C09-276]
ATGTTTGTTGCGAGAGATGCTAGGGGAGAATTGGTAAATGTGTTAGAGGATAAACTTGAGAAGCAAGCATACACCTGCCC
AGCTTGTGGAGGCCAGATCCATTTGCGTCAAGGACCAAGTGTACGGACGCATTTTGCCCATAAATCCTTAAAAGACTGTG
ATTTTTTCTTTGAAAATGAAAGTCCAGAACACATAGCCAATAAGGAATCCCTCTATCACTGGTTGAAAAAAGAGACAAAG
GTTCAATTAGAGTACCCGCTTTCAGAACTTAAACAGATTGCGGATGTATTTGTAAATGGCAATCTAGCTCTAGAAGTTCA
GTGTAGTCCCTTGCCTCAGAAAGTCCTTAAAGAGCGAAGTGAGGGCTATCGTAGTCAGGGTTACCAAGTACTGTGGTTGC
TGGGTCAAAAACTGTGGCTCAAGGAGCGTTTGACTCGTCTACAGCAAGGTTTTCTTTATTTCAGTCAAAACATGGGCTTT
TATGTTTGGGAATTAGACAAGGAAAAACAAGTTTTAAGACTCAAATACCTGATTTACCAGGATCTCCGCGGTAAACTCCA
TTATCAAATCAAGGAATTTTCCTATGGTCAAGGTAGTTTATTGGAAATATTGCGTCTTCCCTATAAGAGACAAAAAATAT
CTCATTTTACAGTTTCTGAGGACAAGGACATCTGTCGCTATATCCGGCAACAACTTTATTATCAAAATCTCTTTTGGATG
AAAGAACAAGCAGAAGCCTATCAAAAGGGAGAAAATATCCTGACTTATGGACTGAAAGAATGGTATCCACAAATTCGACC
AATAGTGGGCAAATTTTTCCAGATTGAACAAGACTTGACTAGCTATTATCAGCACTTTTATACCTATTACCAAAAAAATC
CTCAAAATGATTGGCAAAAGCTTTATCCACCAGCCTTTTATCAGCAATATTTCTTGAAAAATATGGTAGAATAG

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (13-263)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	99.369	100	0.994
coiA	Streptococcus pneumoniae Rx1	98.738	100	0.987
coiA	Streptococcus pneumoniae D39	98.738	100	0.987
coiA	Streptococcus pneumoniae R6	98.738	100	0.987
coiA	Streptococcus mitis NCTC 12261	88.644	100	0.886
coiA	Lactococcus lactis subsp. cremoris KW2	41.975	100	0.429