Detailed information    

insolico Bioinformatically predicted

Overview


Name   comGG/cglG   Type   Machinery gene
Locus tag   Q7626_RS09765 Genome accession   NZ_CP131707
Coordinates   1909392..1909805 (-) Length   137 a.a.
NCBI ID   WP_000265624.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain 2018C08-270     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1904392..1914805
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7626_RS09735 (Q7626_09720) - 1905087..1905911 (-) 825 WP_000727904.1 membrane protein insertase YidC -
  Q7626_RS09740 (Q7626_09725) rnpA 1905886..1906257 (-) 372 WP_000739246.1 ribonuclease P protein component -
  Q7626_RS09745 (Q7626_09730) - 1906274..1906405 (-) 132 WP_000768904.1 hypothetical protein -
  Q7626_RS09750 (Q7626_09735) - 1906406..1907596 (-) 1191 WP_000167766.1 acetate kinase -
  Q7626_RS09755 (Q7626_09740) comYH 1907647..1908600 (-) 954 WP_000345101.1 class I SAM-dependent methyltransferase Machinery gene
  Q7626_RS09760 (Q7626_09745) - 1908661..1909255 (-) 595 Protein_1897 methyltransferase domain-containing protein -
  Q7626_RS09765 (Q7626_09750) comGG/cglG 1909392..1909805 (-) 414 WP_000265624.1 competence type IV pilus minor pilin ComGG Machinery gene
  Q7626_RS09770 (Q7626_09755) comGF/cglF 1909783..1910244 (-) 462 WP_000250542.1 competence type IV pilus minor pilin ComGF Machinery gene
  Q7626_RS09775 (Q7626_09760) comGE/cglE 1910207..1910509 (-) 303 WP_000413382.1 competence type IV pilus minor pilin ComGE Machinery gene
  Q7626_RS09780 (Q7626_09765) comGD/cglD 1910472..1910876 (-) 405 WP_000588013.1 competence type IV pilus minor pilin ComGD Machinery gene
  Q7626_RS09785 (Q7626_09770) comGC/cglC 1910869..1911195 (-) 327 WP_000738636.1 comG operon protein ComGC Machinery gene
  Q7626_RS09790 (Q7626_09775) comGB/cglB 1911197..1912213 (-) 1017 WP_012512625.1 competence type IV pilus assembly protein ComGB Machinery gene
  Q7626_RS09795 (Q7626_09780) comGA/cglA/cilD 1912161..1913102 (-) 942 WP_000249552.1 competence type IV pilus ATPase ComGA Machinery gene
  Q7626_RS09800 (Q7626_09785) - 1913178..1913543 (-) 366 WP_000286415.1 DUF1033 family protein -
  Q7626_RS09805 (Q7626_09790) - 1913694..1914752 (-) 1059 WP_000649468.1 zinc-dependent alcohol dehydrogenase family protein -

Sequence


Protein


Download         Length: 137 a.a.        Molecular weight: 15955.42 Da        Isoelectric Point: 10.2472

>NTDB_id=863914 Q7626_RS09765 WP_000265624.1 1909392..1909805(-) (comGG/cglG) [Streptococcus pneumoniae strain 2018C08-270]
MWKKKKVKAGVLLYAVTIAAIFSLLLQFYLNRQVAHYQDYALNKEKLVAFAMAKRTKDKVEQESGEQVFNLGQVSYQNKK
TGLVTRVRTDKSQYEFLFPSVKIKEEKRDKKEEVATDSSEKVEKKKSEEKPEKKENS

Nucleotide


Download         Length: 414 bp        

>NTDB_id=863914 Q7626_RS09765 WP_000265624.1 1909392..1909805(-) (comGG/cglG) [Streptococcus pneumoniae strain 2018C08-270]
GTGTGGAAAAAGAAAAAAGTTAAGGCAGGTGTTCTCCTCTACGCAGTCACCATAGCAGCCATCTTTAGTCTTTTGTTGCA
ATTTTATTTGAACCGACAAGTCGCCCACTATCAAGACTATGCTTTGAATAAAGAAAAATTGGTTGCTTTTGCTATGGCTA
AACGAACCAAAGATAAGGTTGAGCAAGAAAGTGGGGAACAGGTTTTTAATCTAGGTCAGGTAAGCTATCAAAACAAGAAA
ACTGGCTTAGTGACGAGGGTTCGTACGGATAAGAGCCAATATGAGTTTCTGTTTCCTTCAGTCAAAATCAAAGAAGAGAA
AAGAGATAAAAAGGAAGAGGTAGCGACCGATTCAAGCGAAAAAGTGGAGAAGAAAAAATCAGAAGAGAAGCCTGAAAAGA
AAGAGAATTCCTAG

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGG/cglG Streptococcus pneumoniae Rx1

99.27

100

0.993

  comGG/cglG Streptococcus pneumoniae D39

99.27

100

0.993

  comGG/cglG Streptococcus pneumoniae R6

99.27

100

0.993

  comGG/cglG Streptococcus pneumoniae TIGR4

99.27

100

0.993

  comGG/cglG Streptococcus mitis SK321

87.591

100

0.876

  comGG/cglG Streptococcus mitis NCTC 12261

89.256

88.321

0.788

  comYG Streptococcus mutans UA140

38.806

97.81

0.38

  comYG Streptococcus mutans UA159

38.806

97.81

0.38