Detailed information NTG0863388

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: WAB15_RS15050
• Genome accession: NZ_CP147982
• Coordinates: 3335446..3336729 (-)
• Length: 427 a.a.
• NCBI ID: WP_310716441.1
• Uniprot ID: A0ABZ2QKY9
• Organism: Streptomyces sp. BP-8
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3330446..3341729

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WAB15_RS15040 (WAB15_15010)	-	3331241..3333862 (-)	2622	WP_407286560.1	valine--tRNA ligase	-
WAB15_RS15045 (WAB15_15015)	-	3334024..3334980 (+)	957	WP_399150824.1	hypothetical protein	-
WAB15_RS15050 (WAB15_15020)	clpX	3335446..3336729 (-)	1284	WP_310716441.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
WAB15_RS15055 (WAB15_15025)	clpP	3336910..3337587 (-)	678	WP_399150839.1	ATP-dependent Clp protease proteolytic subunit	Regulator
WAB15_RS15060 (WAB15_15030)	clpP	3337653..3338255 (-)	603	WP_174857796.1	ATP-dependent Clp protease proteolytic subunit	Regulator
WAB15_RS15065 (WAB15_15035)	tig	3338551..3339930 (-)	1380	WP_399150825.1	trigger factor	-
WAB15_RS15080 (WAB15_15050)	-	3340688..3341059 (+)	372	WP_407286561.1	arsenate reductase family protein	-
WAB15_RS15085 (WAB15_15055)	-	3341170..3341364 (-)	195	WP_384440576.1	hypothetical protein	-

Sequence

Protein

• Length: 427 a.a.
• Molecular weight: 46687.46 Da
• Isoelectric Point: 4.8220

>NTDB_id=863388 WAB15_RS15050 WP_310716441.1 3335446..3336729(-) (clpX) [Streptomyces sp. BP-8]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLNGYVVGQDP
AKKALSVAVYNHYKRVQAGENGPGRGDEGIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAFADATALTEAGYVGEDV
ENILLKLIQAADFDIKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQI
DTTNVLFIVGGAFAGLEKIIESRSGAKGIGFGATIRSKREIESKDQLQDVMPEDLVKFGMIPEFIGRLPVLTSVHNLDRE
ALLQILVEPRNALVKQYKRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQAVMYEIPSRKDVARVVITE
DVVHSNVNPTLVPRTRGDSGEPQEKSA

Nucleotide

• Length: 1284 bp

>NTDB_id=863388 WAB15_RS15050 WP_310716441.1 3335446..3336729(-) (clpX) [Streptomyces sp. BP-8]
GTGGCACGCATCGGTGACGGCGGCGACCTGCTCAAGTGCTCATTCTGTGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCTGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAAATCATCGAGGAGGAGCTCGCCGAGACCT
CCGAGGTGCGGTGGGAGGAGCTCCCCAAGCCCCGGGAGATCTACGAGTTCCTGAACGGCTACGTCGTCGGTCAGGACCCC
GCGAAGAAGGCGCTCTCGGTCGCCGTCTACAACCACTACAAGCGGGTGCAGGCGGGCGAGAACGGCCCCGGCCGCGGCGA
CGAGGGCATCGAGCTCGCCAAGTCCAACATCCTGCTGCTCGGCCCGACCGGCTCCGGCAAGACCCTGCTCGCGCAGACCC
TCGCCCGGATGCTGAACGTCCCCTTCGCGTTCGCCGACGCCACGGCCCTGACGGAGGCCGGCTACGTCGGTGAGGACGTC
GAGAACATCCTCCTCAAGCTGATCCAGGCCGCGGACTTCGACATCAAGAAGGCCGAGACCGGCATCATCTACATCGACGA
GATCGACAAGGTCGCCCGCAAGAGCGAAAACCCGTCGATCACGCGCGACGTCTCCGGCGAGGGCGTCCAGCAGGCGCTGC
TGAAGATCCTGGAGGGCACCACCGCCTCCGTGCCGCCCCAGGGCGGCCGTAAGCACCCCCACCAGGAATTCATCCAGATC
GACACCACGAACGTCCTCTTCATCGTCGGCGGCGCCTTCGCCGGCCTGGAGAAGATCATCGAGTCCCGGTCCGGAGCCAA
GGGCATCGGCTTCGGCGCCACGATCCGGTCCAAGCGGGAGATCGAGTCCAAGGACCAGCTCCAGGACGTCATGCCGGAGG
ACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGCCTCCCCGTCCTGACCTCGGTGCACAACCTCGACCGCGAG
GCCCTGCTCCAGATCCTCGTCGAGCCGCGCAACGCGCTCGTCAAGCAGTACAAGCGCCTCTTCGAACTCGACGGTGTCGA
GCTCGACTTCGACCGCCCGGCGCTGGAGGCGATCGCCGACCAGGCGATCCTCCGCGGCACCGGCGCCCGCGGCCTGCGCG
CCATCATGGAGGAGGTCCTCCAGGCGGTGATGTACGAGATCCCGTCCCGCAAGGACGTCGCCCGCGTCGTCATCACCGAG
GACGTCGTTCACTCGAACGTGAACCCGACCCTGGTCCCGCGCACCCGCGGCGACTCGGGCGAGCCCCAGGAGAAGAGCGC
GTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (317-394)

• AAA domain (Cdc48 subfamily) (AAA_2) (114-310)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.843	93.911	0.59
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.415	96.019	0.513