Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | WDV80_RS09055 | Genome accession | NZ_CP147733 |
| Coordinates | 1782280..1782771 (+) | Length | 163 a.a. |
| NCBI ID | WP_000609585.1 | Uniprot ID | P66851 |
| Organism | Streptococcus agalactiae strain SagR272_TC | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1777280..1787771
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WDV80_RS09030 (WDV80_09030) | trxA | 1777772..1778086 (+) | 315 | WP_001162959.1 | thioredoxin | - |
| WDV80_RS09035 (WDV80_09035) | - | 1778132..1778725 (-) | 594 | WP_000402394.1 | helix-turn-helix transcriptional regulator | - |
| WDV80_RS09040 (WDV80_09040) | mutY | 1778902..1780056 (-) | 1155 | WP_000566235.1 | A/G-specific adenine glycosylase | - |
| WDV80_RS09050 (WDV80_09050) | rpsF | 1781981..1782268 (+) | 288 | WP_001151773.1 | 30S ribosomal protein S6 | - |
| WDV80_RS09055 (WDV80_09055) | ssbA | 1782280..1782771 (+) | 492 | WP_000609585.1 | single-stranded DNA-binding protein | Machinery gene |
| WDV80_RS09060 (WDV80_09060) | rpsR | 1782816..1783055 (+) | 240 | WP_000068665.1 | 30S ribosomal protein S18 | - |
| WDV80_RS09065 (WDV80_09065) | - | 1783225..1784169 (+) | 945 | WP_000812121.1 | magnesium transporter CorA family protein | - |
| WDV80_RS09070 (WDV80_09070) | - | 1784194..1784865 (+) | 672 | WP_000174846.1 | DUF1129 family protein | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 18165.81 Da Isoelectric Point: 4.9119
>NTDB_id=863028 WDV80_RS09055 WP_000609585.1 1782280..1782771(+) (ssbA) [Streptococcus agalactiae strain SagR272_TC]
MINNVVLVGRMTRDAELRYTPSNQAVATFSLAVNRNFKNQSGEREADFINCVIWRQQAENLANWAKKGALVGITGRIQTR
NYENQQGQRVYVTEVVAESFQLLESRATREGGSPNSYNNGGYNNAPSNNSYSASSQQTPNFSRDESPFGNSNPMDISDDD
LPF
MINNVVLVGRMTRDAELRYTPSNQAVATFSLAVNRNFKNQSGEREADFINCVIWRQQAENLANWAKKGALVGITGRIQTR
NYENQQGQRVYVTEVVAESFQLLESRATREGGSPNSYNNGGYNNAPSNNSYSASSQQTPNFSRDESPFGNSNPMDISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=863028 WDV80_RS09055 WP_000609585.1 1782280..1782771(+) (ssbA) [Streptococcus agalactiae strain SagR272_TC]
ATGATTAATAATGTAGTACTTGTAGGTCGCATGACCCGTGATGCAGAACTTCGTTATACACCAAGTAATCAAGCGGTAGC
CACTTTTTCACTTGCAGTTAATCGTAATTTTAAAAATCAATCTGGCGAACGTGAGGCTGATTTTATTAACTGTGTTATTT
GGCGCCAACAAGCTGAAAACTTGGCTAACTGGGCAAAAAAAGGTGCTTTGGTTGGAATTACAGGTCGTATCCAAACGCGT
AATTATGAAAACCAACAAGGTCAACGTGTCTATGTAACAGAAGTTGTTGCGGAAAGTTTCCAATTATTGGAAAGTCGTGC
TACACGAGAAGGTGGTTCACCTAACTCTTATAATAACGGTGGCTATAACAATGCTCCGTCAAATAATAGTTATTCAGCTT
CTTCTCAACAAACACCTAATTTTAGTCGTGATGAGAGTCCGTTTGGTAACTCAAATCCAATGGATATTTCAGATGATGAT
CTACCATTCTAA
ATGATTAATAATGTAGTACTTGTAGGTCGCATGACCCGTGATGCAGAACTTCGTTATACACCAAGTAATCAAGCGGTAGC
CACTTTTTCACTTGCAGTTAATCGTAATTTTAAAAATCAATCTGGCGAACGTGAGGCTGATTTTATTAACTGTGTTATTT
GGCGCCAACAAGCTGAAAACTTGGCTAACTGGGCAAAAAAAGGTGCTTTGGTTGGAATTACAGGTCGTATCCAAACGCGT
AATTATGAAAACCAACAAGGTCAACGTGTCTATGTAACAGAAGTTGTTGCGGAAAGTTTCCAATTATTGGAAAGTCGTGC
TACACGAGAAGGTGGTTCACCTAACTCTTATAATAACGGTGGCTATAACAATGCTCCGTCAAATAATAGTTATTCAGCTT
CTTCTCAACAAACACCTAATTTTAGTCGTGATGAGAGTCCGTTTGGTAACTCAAATCCAATGGATATTTCAGATGATGAT
CTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
57.714 |
100 |
0.62 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.064 |
100 |
0.62 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
55.963 |
66.871 |
0.374 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
56.604 |
65.031 |
0.368 |