Detailed information NTG0862095

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: Q6G12_RS01995
• Genome accession: NZ_CP130900
• Coordinates: 431121..432269 (+)
• Length: 382 a.a.
• NCBI ID: WP_003100959.1
• Uniprot ID: G3XCX3
• Organism: Pseudomonas aeruginosa strain CW13
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 426121..437269

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q6G12_RS01970 (Q6G12_01970)	-	427272..427568 (-)	297	WP_031628111.1	DUF167 domain-containing protein	-
Q6G12_RS01975 (Q6G12_01975)	-	427565..428158 (-)	594	WP_003084544.1	YggT family protein	-
Q6G12_RS01980 (Q6G12_01980)	proC	428169..428990 (-)	822	WP_003084546.1	pyrroline-5-carboxylate reductase	-
Q6G12_RS01985 (Q6G12_01985)	-	429002..429694 (-)	693	WP_003084549.1	YggS family pyridoxal phosphate-dependent enzyme	-
Q6G12_RS01990 (Q6G12_01990)	pilT	429909..430943 (+)	1035	WP_003084552.1	type IV pilus twitching motility protein PilT	Machinery gene
Q6G12_RS01995 (Q6G12_01995)	pilU	431121..432269 (+)	1149	WP_003100959.1	type IV pilus ATPase PilU	Machinery gene
Q6G12_RS02000 (Q6G12_02000)	czcD	432277..433176 (-)	900	WP_003100957.1	CDF family zinc transporter CzcD	-
Q6G12_RS02005 (Q6G12_02005)	-	433332..433736 (+)	405	WP_003084560.1	NINE protein	-
Q6G12_RS02010 (Q6G12_02010)	-	433979..435352 (+)	1374	WP_015502220.1	pyridoxal-phosphate dependent enzyme	-
Q6G12_RS02015 (Q6G12_02015)	-	435349..436533 (+)	1185	WP_003117897.1	cystathionine gamma-synthase	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 42532.81 Da
• Isoelectric Point: 6.7792

>NTDB_id=862095 Q6G12_RS01995 WP_003100959.1 431121..432269(+) (pilU) [Pseudomonas aeruginosa strain CW13]
MEFEKLLRLMVEKGGSDLFITAGVPPSMKVNGRVMPVTKTPLSPEQTRETVLGVMNEQQRRDFAENHECNFAISARGIGR
FRVSAFYQRNLVGMVLRRIETNIPTLEELKLPEILKKLALTKRGLVIFVGATGTGKSTSLAAMIGYRNKNSTGHIISIED
PIEYIHQHQGCIVTQREVGLDTDSFEVALKNTLRQAPDVIMIGEVRSRETMDHAVAFAETGHLCLATLHANNANQALERI
IHFFPADRHGQVWMDLSLNLKAIVAQQLVPTPDGKGRRAVIEVLLNTPLAADLIRKGEVHELKPLMKRSTEQGMQTFDQA
LYQLYTQGEITYEDALAHADSANDLRLMIKLGSESDADHLSSLTQGLSLEITDDDPAGRRFR

Nucleotide

• Length: 1149 bp

>NTDB_id=862095 Q6G12_RS01995 WP_003100959.1 431121..432269(+) (pilU) [Pseudomonas aeruginosa strain CW13]
ATGGAATTCGAAAAGCTGCTGCGCCTGATGGTGGAAAAGGGCGGCTCCGACCTGTTCATTACCGCCGGCGTACCGCCGTC
GATGAAGGTCAACGGCCGGGTGATGCCGGTGACCAAGACGCCGCTGTCGCCGGAGCAGACCCGCGAGACCGTGCTAGGCG
TGATGAACGAGCAGCAGCGCCGCGATTTCGCCGAGAACCATGAGTGCAACTTCGCCATCAGCGCCCGCGGCATCGGCCGC
TTCCGGGTCAGTGCCTTCTACCAGCGCAACCTGGTGGGCATGGTATTGCGCCGGATCGAGACCAACATCCCGACCCTGGA
AGAGCTGAAGCTCCCGGAAATCCTCAAGAAGCTGGCGCTGACCAAGCGCGGCCTGGTGATCTTCGTCGGCGCCACCGGCA
CCGGCAAGTCCACCTCGCTGGCGGCGATGATCGGCTACCGCAACAAGAACTCCACCGGGCACATCATCTCCATCGAGGAC
CCGATCGAGTACATCCACCAGCACCAGGGCTGCATCGTCACCCAGCGCGAGGTGGGGCTGGACACCGATTCCTTCGAGGT
GGCGCTGAAGAACACCCTGCGCCAGGCGCCGGACGTGATCATGATCGGCGAGGTGCGCTCGCGGGAGACCATGGACCACG
CCGTGGCCTTCGCCGAGACCGGCCACCTGTGCCTGGCGACCCTGCACGCGAACAACGCCAACCAGGCGCTGGAGCGGATC
ATCCACTTCTTCCCGGCCGACCGTCATGGCCAGGTGTGGATGGACCTGTCGCTGAACCTCAAGGCCATCGTCGCCCAGCA
ACTGGTGCCGACCCCCGACGGCAAGGGGCGGCGGGCGGTGATCGAGGTGCTGCTGAACACCCCGCTGGCCGCCGACCTGA
TCCGCAAGGGCGAGGTGCACGAGCTGAAGCCGCTGATGAAGCGCTCCACCGAGCAGGGCATGCAGACCTTCGACCAGGCG
CTGTACCAGCTCTACACCCAGGGCGAGATCACCTACGAGGACGCCCTGGCCCACGCCGACTCGGCCAACGACCTGCGCCT
GATGATCAAGCTCGGTTCGGAAAGCGACGCCGACCACCTGTCGAGCCTGACCCAGGGCCTGAGCCTGGAAATCACCGACG
ACGACCCTGCCGGCCGGCGCTTCCGCTGA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (111-270)

3D structure

• AlphaFold DB: G3XCX3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	88.482	100	0.885
pilU	Acinetobacter baylyi ADP1	65.266	93.455	0.61
pilU	Vibrio cholerae strain A1552	60.286	91.623	0.552
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	43.068	88.743	0.382