Detailed information NTG0861950

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: Q6383_RS11025
• Genome accession: NZ_CP130896
• Coordinates: 2096786..2098039 (+)
• Length: 417 a.a.
• NCBI ID: WP_047920694.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain NJ1911400
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2091786..2103039

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q6383_RS11005 (Q6383_11005)	-	2092537..2093538 (+)	1002	WP_103195218.1	thiamine ABC transporter substrate-binding protein	-
Q6383_RS11010 (Q6383_11010)	-	2093632..2094480 (+)	849	WP_003687000.1	mechanosensitive ion channel family protein	-
Q6383_RS11015 (Q6383_11015)	-	2094506..2094988 (+)	483	WP_003694396.1	CinA family protein	-
Q6383_RS11020 (Q6383_11020)	msrAB	2095072..2096640 (-)	1569	WP_003694393.1	bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	-
Q6383_RS11025 (Q6383_11025)	pilA	2096786..2098039 (+)	1254	WP_047920694.1	signal recognition particle-docking protein FtsY	Machinery gene
Q6383_RS11030 (Q6383_11030)	-	2098304..2099166 (-)	863	Protein_2121	opacity family porin	-
Q6383_RS11035 (Q6383_11035)	-	2099696..2100202 (-)	507	Protein_2122	pilin	-
Q6383_RS11040 (Q6383_11040)	-	2101018..2101136 (-)	119	Protein_2123	pilin	-
Q6383_RS11045 (Q6383_11045)	-	2101259..2101579 (-)	321	Protein_2124	pilin	-
Q6383_RS11050 (Q6383_11050)	-	2101640..2102023 (-)	384	Protein_2125	pilin	-

Sequence

Protein

• Length: 417 a.a.
• Molecular weight: 44317.68 Da
• Isoelectric Point: 4.8618

>NTDB_id=861950 Q6383_RS11025 WP_047920694.1 2096786..2098039(+) (pilA) [Neisseria gonorrhoeae strain NJ1911400]
MFSFFRRKKKQETPALEEAQVQETAAKVESEVAQIVGNIKEDVESLAESVKGRAESAVETVSGAVEQVKETVAEMPSEAG
EAAERVESAKEAVAETVGEAVGQVQEAVATTEEHKLGWAARLKQGLAKSRDKMAKSLAGVFGGGQIGEDLYEELETVLIT
GDMGMDATEYLMKDVRGRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPETKEPFVIMLAGINGAGKTTSIGKLAKY
FQAQGKSVLLAAGDTFRAAAREQLQAWGGRNNVTVISQTTGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEI
KKVKRVLQKAIPGAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGI
DDLRPFDARAFVDALLD

Nucleotide

• Length: 1254 bp

>NTDB_id=861950 Q6383_RS11025 WP_047920694.1 2096786..2098039(+) (pilA) [Neisseria gonorrhoeae strain NJ1911400]
ATGTTCAGCTTCTTCCGTCGCAAGAAAAAACAGGAAACGCCGGCTCTCGAGGAGGCCCAAGTTCAGGAAACCGCAGCAAA
AGTAGAATCTGAAGTTGCTCAAATAGTTGGAAATATTAAAGAAGATGTCGAATCTTTAGCAGAAAGCGTCAAAGGGCGGG
CCGAATCTGCCGTTGAAACCGTCAGCGGTGCGGTTGAACAGGTAAAGGAAACCGTTGCCGAGATGCCGTCTGAAGCAGGG
GAAGCGGCGGAACGCGTTGAATCCGCAAAAGAAGCTGTTGCCGAAACCGTCGGCGAGGCTGTCGGGCAAGTTCAAGAAGC
CGTTGCGACAACTGAAGAACACAAGCTCGGTTGGGCTGCGCGTTTGAAACAAGGCTTGGCCAAATCACGCGACAAAATGG
CGAAATCGCTGGCCGGCGTGTTCGGCGGCGGACAAATCGGCGAGGATTTGTACGAAGAGCTGGAAACCGTGCTGATTACC
GGCGATATGGGCATGGATGCCACCGAATACCTGATGAAAGACGTGCGCGGCCGCGTCAGCCTCAAAGGGCTGAAAGACGG
CAACGAATTGCGCGGCGCGTTGAAAGAAGCCTTGTACGACCTGATTAAGCCGTTGGAAAAACCGCTGGTCTTGCCCGAAA
CTAAAGAGCCTTTCGTGATTATGCTTGCCGGTATCAACGGCGCGGGCAAAACCACGTCTATCGGCAAACTCGCCAAATAT
TTCCAAGCGCAGGGCAAATCCGTATTGCTGGCGGCGGGCGATACCTTCCGCGCCGCCGCCCGTGAGCAGCTTCAGGCTTG
GGGCGGGCGCAACAATGTAACCGTCATTTCACAAACCACGGGCGATTCCGCCGCCGTGTGCTTCGATGCCGTCCAAGCCG
CCAAAGCGCGCGGGATCGACATCGTGCTTGCCGACACCGCCGGCCGCCTGCCCACGCAGCTTCATTTGATGGAAGAAATC
AAAAAAGTGAAGCGCGTGCTGCAAAAAGCCATTCCCGGCGCGCCGCACGAAATCATCGTCGTACTCGATGCCAATATCGG
GCAAAACGCCGTCAACCAAGTCAAAGCCTTTGACGACGCATTGGGGCTGACGGGGCTTATCGTTACCAAACTCGACGGCA
CGGCAAAAGGCGGCATCCTCGCCGCGCTTGCTTCCGACCGCCCCGTCCCCGTCCGCTACATCGGCGTGGGCGAAGGCATA
GACGACCTGCGCCCGTTTGACGCGCGCGCGTTTGTGGACGCACTGCTGGATTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (217-416)

• SRP54-type protein, helical bundle domain (SRP54_N) (132-198)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	99.76	100	0.998