Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   STYK_RS10230 Genome accession   NZ_AP024523
Coordinates   2054149..2054907 (+) Length   252 a.a.
NCBI ID   WP_020902614.1    Uniprot ID   A0A1X1JGY4
Organism   Streptococcus toyakuensis strain TP1632     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2049149..2059907
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STYK_RS10200 (STYK_19590) comE 2049755..2050508 (-) 754 Protein_1963 competence system response regulator transcription factor ComE -
  STYK_RS10205 (STYK_19600) comD/comD1 2050505..2051830 (-) 1326 WP_084923904.1 competence system sensor histidine kinase ComD Regulator
  STYK_RS10210 (STYK_19610) comC/comC2 2051843..2051965 (-) 123 WP_060627323.1 competence-stimulating peptide ComC Regulator
  STYK_RS10220 (STYK_19620) rlmH 2052247..2052726 (-) 480 WP_060627322.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  STYK_RS10225 (STYK_19630) htrA 2052910..2054091 (+) 1182 WP_060627321.1 S1C family serine protease Regulator
  STYK_RS10230 (STYK_19640) spo0J 2054149..2054907 (+) 759 WP_020902614.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29148.47 Da        Isoelectric Point: 6.3016

>NTDB_id=85782 STYK_RS10230 WP_020902614.1 2054149..2054907(+) (spo0J) [Streptococcus toyakuensis strain TP1632]
MEKFEMISITDIQKNPYQPRKEFDGEKLHELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLRYIPAVVKQ
LSDQEMMIQSIIENLQRENLNPIEEARAYESLVEKGFTHAEIADKMGKSRPYISNSIRLLSLPEQILSEVENGQLSQAHA
RSLVGLNKEQQDYFFQRIIEEDISVRKLEALLTEKKQKKLQKNDYFIQNEEEQLKKILGLDVEIKLSKKDSGKIIIAFSN
QEEYSRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=85782 STYK_RS10230 WP_020902614.1 2054149..2054907(+) (spo0J) [Streptococcus toyakuensis strain TP1632]
ATGGAAAAATTTGAAATGATTTCTATCACAGATATACAAAAAAATCCCTATCAACCTCGAAAAGAATTTGATGGAGAAAA
ACTACATGAACTAGCACAGTCTATCAAAGAAAATGGGGTCATTCAACCGATTATTGTTCGTCAATCTCCTGTTATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGCTATCGGGCTTCACTTTTAGCTGGTCTAAGGTATATCCCAGCTGTTGTTAAGCAG
CTTTCAGATCAAGAGATGATGATCCAATCTATCATTGAAAATTTACAGAGAGAAAATTTAAATCCAATAGAAGAAGCACG
CGCCTATGAATCTCTTGTAGAGAAAGGATTTACCCATGCTGAAATTGCAGATAAAATGGGCAAGTCTCGTCCTTATATCA
GCAACTCTATTCGCTTGCTGTCCTTGCCAGAACAGATCCTTTCAGAAGTAGAAAATGGCCAACTATCACAAGCCCATGCG
CGTTCGCTAGTTGGGTTGAATAAGGAACAACAAGACTATTTCTTTCAACGAATTATAGAAGAAGACATTTCTGTAAGGAA
GTTAGAAGCTCTTCTGACAGAGAAAAAACAAAAGAAACTGCAAAAAAATGATTATTTCATACAAAATGAAGAAGAACAGT
TAAAAAAAATACTCGGATTAGATGTAGAAATCAAACTGTCTAAAAAAGATAGTGGAAAAATCATTATTGCTTTCTCAAAC
CAAGAAGAATACAGTAGAATTATCAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(144-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1X1JGY4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

49.802

100

0.5

Multiple sequence alignment