Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | WHT_RS27190 | Genome accession | NZ_AP024504 |
| Coordinates | 5319583..5320095 (-) | Length | 170 a.a. |
| NCBI ID | WP_000981966.1 | Uniprot ID | A0A0A3WKS9 |
| Organism | Bacillus cereus strain HT18 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 5314583..5325095
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHT_RS27170 (WHT_c54610) | rplI | 5315794..5316240 (-) | 447 | WP_000864228.1 | 50S ribosomal protein L9 | - |
| WHT_RS27175 (WHT_c54620) | - | 5316237..5318210 (-) | 1974 | WP_063219897.1 | DHH family phosphoesterase | - |
| WHT_RS27180 (WHT_c54630) | - | 5318289..5319224 (-) | 936 | WP_000814840.1 | YybS family protein | - |
| WHT_RS27185 (WHT_c54640) | rpsR | 5319304..5319537 (-) | 234 | WP_000918873.1 | 30S ribosomal protein S18 | - |
| WHT_RS27190 (WHT_c54650) | ssbA | 5319583..5320095 (-) | 513 | WP_000981966.1 | single-stranded DNA-binding protein | Machinery gene |
| WHT_RS27195 (WHT_c54660) | rpsF | 5320122..5320412 (-) | 291 | WP_001233778.1 | 30S ribosomal protein S6 | - |
| WHT_RS27200 (WHT_c54670) | ychF | 5320604..5321704 (-) | 1101 | WP_000524657.1 | redox-regulated ATPase YchF | - |
| WHT_RS27205 (WHT_c54680) | - | 5321820..5322017 (-) | 198 | WP_000435485.1 | DUF951 domain-containing protein | - |
| WHT_RS27210 (WHT_c54690) | - | 5322038..5322919 (-) | 882 | WP_000364814.1 | mechanosensitive ion channel family protein | - |
| WHT_RS27215 (WHT_c54700) | yyaC | 5323179..5323775 (+) | 597 | WP_001020714.1 | spore protease YyaC | - |
| WHT_RS27220 (WHT_c54710) | spo0J | 5323796..5324647 (-) | 852 | WP_001051832.1 | stage 0 sporulation protein Spo0J | - |
Sequence
Protein
Download Length: 170 a.a. Molecular weight: 18494.29 Da Isoelectric Point: 4.9327
>NTDB_id=85545 WHT_RS27190 WP_000981966.1 5319583..5320095(-) (ssbA) [Bacillus cereus strain HT18]
MMNRVILVGRLTKDPDLRYTPNGVAVATFTLAVNRAFANQQGEREADFINCVIWRKQAENVANYLKKGSLAGVDGRLQTR
NYEGQDGKRVYVTEVLAESVQFLEPRNGGGEQRGSFNQQPSGAGFGNQGSNPFGQSSNSGNQGNSGFTKNDDPFSNVGQP
IDISDDDLPF
MMNRVILVGRLTKDPDLRYTPNGVAVATFTLAVNRAFANQQGEREADFINCVIWRKQAENVANYLKKGSLAGVDGRLQTR
NYEGQDGKRVYVTEVLAESVQFLEPRNGGGEQRGSFNQQPSGAGFGNQGSNPFGQSSNSGNQGNSGFTKNDDPFSNVGQP
IDISDDDLPF
Nucleotide
Download Length: 513 bp
>NTDB_id=85545 WHT_RS27190 WP_000981966.1 5319583..5320095(-) (ssbA) [Bacillus cereus strain HT18]
TTGATGAATCGTGTTATCCTCGTTGGTCGTTTAACTAAGGACCCTGACTTACGTTACACGCCCAATGGTGTCGCAGTAGC
TACTTTTACGTTAGCTGTGAATCGCGCATTTGCCAATCAGCAAGGTGAGCGTGAAGCTGACTTTATTAATTGTGTAATAT
GGCGTAAACAAGCAGAAAACGTAGCAAATTATTTGAAAAAAGGTAGCTTAGCAGGCGTAGATGGGCGTCTTCAAACTCGT
AATTACGAGGGACAAGATGGTAAACGTGTATACGTAACAGAAGTTCTTGCGGAAAGCGTGCAATTTTTAGAGCCGCGTAA
TGGCGGTGGGGAGCAACGTGGTTCATTTAATCAGCAACCATCAGGAGCTGGTTTCGGTAACCAAGGCTCTAACCCATTTG
GTCAATCTAGTAATTCAGGTAACCAAGGTAACTCTGGATTTACGAAGAATGACGATCCATTTTCAAATGTAGGTCAACCG
ATCGACATTTCCGACGACGATTTACCGTTCTAA
TTGATGAATCGTGTTATCCTCGTTGGTCGTTTAACTAAGGACCCTGACTTACGTTACACGCCCAATGGTGTCGCAGTAGC
TACTTTTACGTTAGCTGTGAATCGCGCATTTGCCAATCAGCAAGGTGAGCGTGAAGCTGACTTTATTAATTGTGTAATAT
GGCGTAAACAAGCAGAAAACGTAGCAAATTATTTGAAAAAAGGTAGCTTAGCAGGCGTAGATGGGCGTCTTCAAACTCGT
AATTACGAGGGACAAGATGGTAAACGTGTATACGTAACAGAAGTTCTTGCGGAAAGCGTGCAATTTTTAGAGCCGCGTAA
TGGCGGTGGGGAGCAACGTGGTTCATTTAATCAGCAACCATCAGGAGCTGGTTTCGGTAACCAAGGCTCTAACCCATTTG
GTCAATCTAGTAATTCAGGTAACCAAGGTAACTCTGGATTTACGAAGAATGACGATCCATTTTCAAATGTAGGTCAACCG
ATCGACATTTCCGACGACGATTTACCGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
72.571 |
100 |
0.747 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
58.621 |
100 |
0.6 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
65.094 |
62.353 |
0.406 |
| ssb | Glaesserella parasuis strain SC1401 |
37.43 |
100 |
0.394 |