Detailed information NTG0854566

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: V2W30_RS13630
• Genome accession: NZ_CP146022
• Coordinates: 2925478..2926764 (-)
• Length: 428 a.a.
• NCBI ID: WP_338696463.1
• Uniprot ID: A0ACD5AB37
• Organism: Streptomyces sp. Q6
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2920478..2931764

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V2W30_RS13615 (V2W30_13615)	-	2921489..2921650 (+)	162	WP_338696459.1	hypothetical protein	-
V2W30_RS13620 (V2W30_13620)	-	2921706..2924336 (-)	2631	WP_338696460.1	valine--tRNA ligase	-
V2W30_RS13625 (V2W30_13625)	-	2924452..2925393 (+)	942	WP_338696462.1	hypothetical protein	-
V2W30_RS13630 (V2W30_13630)	clpX	2925478..2926764 (-)	1287	WP_338696463.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
V2W30_RS13635 (V2W30_13635)	clpP	2926921..2927580 (-)	660	WP_338696464.1	ATP-dependent Clp protease proteolytic subunit	Regulator
V2W30_RS13640 (V2W30_13640)	clpP	2927643..2928248 (-)	606	WP_338703597.1	ATP-dependent Clp protease proteolytic subunit	Regulator
V2W30_RS13645 (V2W30_13645)	tig	2928520..2929902 (-)	1383	WP_338696466.1	trigger factor	-
V2W30_RS13660 (V2W30_13660)	-	2930452..2931183 (-)	732	WP_338696468.1	GAF domain-containing protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46779.47 Da
• Isoelectric Point: 4.7885

>NTDB_id=854566 V2W30_RS13630 WP_338696463.1 2925478..2926764(-) (clpX) [Streptomyces sp. Q6]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGAASREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRSGAKGIGFGATIHSKRELEEKDQFQEVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRRTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
AEAVHSNVNPTLIPRDARGTGGGEQKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=854566 V2W30_RS13630 WP_338696463.1 2925478..2926764(-) (clpX) [Streptomyces sp. Q6]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGTGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGTCCCGGTGTATACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAGCTCGCCGAGACGA
GCGAAGTGCGGTGGGAGGAACTCCCGAAGCCGCGCGAGATCTATGAATTCCTCGAGGGTTACGTCGTGGGCCAGGAGGCC
GCCAAGAAGGCGCTCTCCGTGGCGGTCTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACGGCGGAGCGGCGAGCCG
CGAGGACGCGATCGAACTCGCGAAGTCCAACATCCTGCTGCTCGGCCCCACGGGCTCGGGCAAGACGCTGCTCGCCCAGA
CGCTCGCCCGGATGCTGAACGTCCCGTTCGCGATCGCGGACGCGACGGCGCTCACCGAGGCGGGCTACGTCGGCGAGGAC
GTCGAGAACATCCTCCTGAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTGGCTCGGAAGTCCGAGAACCCGTCGATCACCCGCGATGTCAGCGGCGAGGGTGTCCAGCAGGCCC
TCCTGAAGATCCTCGAGGGCACCACCGCCTCCGTCCCGCCGCAGGGCGGACGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGAGCCTTCGCCGGTCTGGAGAAGATCATCGAGTCGCGGTCCGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCACTCCAAGCGCGAGCTGGAGGAGAAGGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGTCTCCCCGTCATCACCTCGGTCCACAACCTGGACCGC
GAAGCCCTCCTCCAGATCCTCGTCGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCCGCACCGGCGCCCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTCCAGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTCGCCCGCGTCGTCATCACA
GCGGAGGCCGTTCACTCGAACGTGAACCCGACGCTGATTCCGCGGGATGCGCGCGGCACGGGCGGCGGCGAGCAGAAGTC
GGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.524	94.159	0.598
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.501	96.028	0.523