Detailed information
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | QYT28_RS13045 | Genome accession | NZ_CP129556 |
| Coordinates | 2653156..2653659 (+) | Length | 167 a.a. |
| NCBI ID | WP_000934799.1 | Uniprot ID | A0A7U7IE99 |
| Organism | Staphylococcus aureus strain 137G | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2648156..2658659
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QYT28_RS13015 (QYT28_12990) | - | 2649096..2649941 (+) | 846 | WP_001573568.1 | ParB/RepB/Spo0J family partition protein | - |
| QYT28_RS13020 (QYT28_12995) | - | 2650095..2650976 (+) | 882 | WP_000373076.1 | mechanosensitive ion channel family protein | - |
| QYT28_RS13025 (QYT28_13000) | - | 2651006..2651209 (+) | 204 | WP_416470842.1 | DUF951 domain-containing protein | - |
| QYT28_RS13030 (QYT28_13005) | ychF | 2651221..2652318 (+) | 1098 | WP_001218732.1 | redox-regulated ATPase YchF | - |
| QYT28_RS13035 (QYT28_13010) | - | 2652404..2652595 (-) | 192 | WP_001052483.1 | hypothetical protein | - |
| QYT28_RS13040 (QYT28_13015) | rpsF | 2652839..2653135 (+) | 297 | WP_001261460.1 | 30S ribosomal protein S6 | - |
| QYT28_RS13045 (QYT28_13020) | ssbA | 2653156..2653659 (+) | 504 | WP_000934799.1 | single-stranded DNA-binding protein | Machinery gene |
| QYT28_RS13050 (QYT28_13025) | rpsR | 2653711..2653953 (+) | 243 | WP_000897044.1 | 30S ribosomal protein S18 | - |
| QYT28_RS13055 (QYT28_13030) | - | 2654191..2655198 (-) | 1008 | WP_001080636.1 | Abi family protein | - |
| QYT28_RS13060 (QYT28_13035) | - | 2655204..2655918 (-) | 715 | Protein_2544 | tyrosine-type recombinase/integrase | - |
| QYT28_RS13065 (QYT28_13040) | - | 2656155..2656523 (+) | 369 | WP_000849155.1 | YxeA family protein | - |
| QYT28_RS13070 (QYT28_13045) | - | 2656704..2657276 (+) | 573 | WP_000769723.1 | PepSY domain-containing protein | - |
| QYT28_RS13075 (QYT28_13050) | - | 2657414..2657677 (-) | 264 | WP_001055897.1 | helix-turn-helix domain-containing protein | - |
| QYT28_RS13080 (QYT28_13055) | - | 2657971..2658225 (+) | 255 | WP_000466746.1 | GlsB/YeaQ/YmgE family stress response membrane protein | - |
| QYT28_RS13085 (QYT28_13060) | - | 2658264..2658473 (-) | 210 | WP_000211680.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 167 a.a. Molecular weight: 18539.12 Da Isoelectric Point: 4.7305
>NTDB_id=854321 QYT28_RS13045 WP_000934799.1 2653156..2653659(+) (ssbA) [Staphylococcus aureus strain 137G]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
Nucleotide
Download Length: 504 bp
>NTDB_id=854321 QYT28_RS13045 WP_000934799.1 2653156..2653659(+) (ssbA) [Staphylococcus aureus strain 137G]
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCACAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCACAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
65.341 |
100 |
0.689 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
54.971 |
100 |
0.563 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
63.473 |
0.371 |
| ssb | Glaesserella parasuis strain SC1401 |
34.463 |
100 |
0.365 |