Detailed information    

insolico Bioinformatically predicted

Overview

Name   brsR   Type   Regulator
Locus tag   V6U67_RS00305 Genome accession   NZ_CP145865
Coordinates   50369..50806 (-) Length   145 a.a.
NCBI ID   WP_014633775.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS8     
Function   antagonizing the proteolysis of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 45369..55806
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U67_RS00285 (V6U67_00285) argR 46545..46973 (+) 429 WP_170314548.1 arginine repressor -
  V6U67_RS00290 (V6U67_00290) - 46973..47332 (+) 360 WP_002889586.1 YlbF family regulator -
  V6U67_RS00295 (V6U67_00295) hexA 47352..49883 (+) 2532 WP_410531299.1 DNA mismatch repair protein MutS Machinery gene
  V6U67_RS00300 (V6U67_00300) - 49917..50372 (-) 456 WP_014633774.1 DUF3021 domain-containing protein -
  V6U67_RS00305 (V6U67_00305) brsR 50369..50806 (-) 438 WP_014633775.1 LytTR family DNA-binding domain-containing protein Regulator
  V6U67_RS00310 (V6U67_00310) - 50985..51290 (+) 306 WP_002886319.1 hypothetical protein -
  V6U67_RS00315 (V6U67_00315) hexB 51340..53283 (+) 1944 WP_022495805.1 DNA mismatch repair endonuclease MutL Machinery gene
  V6U67_RS00320 (V6U67_00320) - 53414..53635 (+) 222 WP_022495804.1 hypothetical protein -
  V6U67_RS00325 (V6U67_00325) ruvA 53793..54383 (+) 591 WP_002886323.1 Holliday junction branch migration protein RuvA Machinery gene
  V6U67_RS00330 (V6U67_00330) - 54392..54946 (+) 555 WP_002886325.1 DNA-3-methyladenine glycosylase I -

Sequence

Protein


Download         Length: 145 a.a.        Molecular weight: 17061.66 Da        Isoelectric Point: 9.1546

>NTDB_id=853680 V6U67_RS00305 WP_014633775.1 50369..50806(-) (brsR) [Streptococcus salivarius strain KSS8]
MKIKVQIDSVFQEEMLQIQAPSRTPKIQQVVEFVESLDDNQRLKGKKDGETYFIESNAISRIYIENRQVLAETIQGEYHL
GLRLYQVLEKLPSYFIKISQSEIVNLKEIERFNITPNGLVEIHLKNKETTYSSRRYLKAIKEKLQ

Nucleotide


Download         Length: 438 bp        

>NTDB_id=853680 V6U67_RS00305 WP_014633775.1 50369..50806(-) (brsR) [Streptococcus salivarius strain KSS8]
ATGAAAATAAAAGTTCAGATTGACTCGGTATTTCAAGAAGAAATGTTGCAGATTCAGGCACCTAGTCGGACGCCCAAGAT
TCAGCAAGTGGTCGAGTTTGTCGAAAGTTTGGATGATAACCAACGACTCAAAGGAAAAAAAGATGGCGAAACTTATTTCA
TCGAGTCTAATGCTATTTCCAGAATCTACATCGAAAATCGTCAAGTTCTAGCTGAAACTATTCAAGGAGAGTACCACTTA
GGCTTACGTCTCTATCAAGTTTTAGAAAAACTGCCATCTTACTTTATCAAAATCTCACAATCAGAGATTGTCAACCTCAA
AGAAATTGAACGCTTCAACATTACCCCTAACGGCCTCGTTGAAATTCACCTTAAAAACAAGGAAACCACCTACTCATCAC
GCCGTTACCTCAAAGCAATAAAGGAGAAATTACAATGA

Domains

Predicted by InterProScan.

LytTr DNA-binding domain (LytTR)

(50-144)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  brsR Streptococcus mutans UA159

36.806

99.31

0.366