Detailed information NTG0085032

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: JSX26_RS00630
• Genome accession: NZ_AP024402
• Coordinates: 135746..136861 (+)
• Length: 371 a.a.
• NCBI ID: WP_203763798.1
• Uniprot ID: -
• Organism: Aeromonas caviae strain KAM376
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 130746..141861

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JSX26_RS00610 (KAM376_01170)	rsmB	131725..133017 (-)	1293	WP_201871917.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
JSX26_RS00615 (KAM376_01180)	fmt	133078..134022 (-)	945	WP_201927519.1	methionyl-tRNA formyltransferase	-
JSX26_RS00620 (KAM376_01190)	def	134035..134547 (-)	513	WP_010672507.1	peptide deformylase	-
JSX26_RS00625 (KAM376_01200)	-	134656..135744 (+)	1089	WP_203763795.1	LysM peptidoglycan-binding domain-containing protein	-
JSX26_RS00630 (KAM376_01210)	dprA	135746..136861 (+)	1116	WP_203763798.1	DNA-processing protein DprA	Machinery gene
JSX26_RS00635 (KAM376_01220)	-	136854..137327 (+)	474	WP_010672510.1	DUF494 family protein	-
JSX26_RS00640 (KAM376_01230)	-	137382..137939 (+)	558	WP_203763801.1	type I DNA topoisomerase	-
JSX26_RS00645 (KAM376_01240)	-	138218..138778 (+)	561	WP_039039520.1	Sua5/YciO/YrdC/YwlC family protein	-
JSX26_RS00650 (KAM376_01250)	hemF	138879..139787 (+)	909	WP_103244068.1	oxygen-dependent coproporphyrinogen oxidase	-
JSX26_RS00655 (KAM376_01260)	aroE	139891..140712 (+)	822	WP_203763804.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 371 a.a.
• Molecular weight: 39118.89 Da
• Isoelectric Point: 4.9190

>NTDB_id=85032 JSX26_RS00630 WP_203763798.1 135746..136861(+) (dprA) [Aeromonas caviae strain KAM376]
MSLPLERLSLWLTLDAVTGIGPVTAARLLAHVGGDITTLFDSDDGALRALGLQSAQIQQMRWPLPVVEQGLSWAAEPGNH
LLCPDDPAYPALLKEISGAPLLLYCRGNVSSLSLPQLAMVGTRHPTYAGKDNATRLCAELVGCGLAITSGLALGIDGVCH
QQALASGGITLAVLGSGLDCLYPKRHQGLAMQILEQEGLLVSELAPQQGPLAEHFPRRNRIISGLSLGTLVVEAAEQSGS
LITARYALEQGREVFAVPGAPQNAQAAGCNRLLQQGAKLVLNAADILEEFPRLVLPPGPVNGSSEAQHNSELPYADLLDN
VDYETTSVDTVAERARLPVDVVLGRLVELELVGAVMAVAGGYVRARRANHV

Nucleotide

• Length: 1116 bp

>NTDB_id=85032 JSX26_RS00630 WP_203763798.1 135746..136861(+) (dprA) [Aeromonas caviae strain KAM376]
GTGTCCTTGCCACTGGAGCGGTTGTCGCTATGGCTGACGCTGGATGCCGTTACAGGCATAGGCCCGGTCACCGCCGCTCG
CCTGTTGGCTCATGTGGGTGGTGACATCACAACTCTGTTTGACTCAGACGATGGCGCCCTGCGAGCTCTTGGTCTGCAGA
GTGCCCAGATTCAGCAGATGAGATGGCCTCTTCCTGTCGTGGAGCAGGGATTGAGCTGGGCCGCCGAGCCCGGCAATCAC
CTCCTCTGTCCCGATGACCCCGCATATCCTGCCCTGCTTAAAGAGATTTCCGGCGCCCCGCTCTTGCTCTACTGCCGCGG
GAACGTCTCATCCCTCTCCCTGCCACAGTTGGCGATGGTGGGTACCCGCCACCCCACCTATGCCGGCAAAGACAATGCGA
CACGCTTGTGTGCCGAGTTGGTGGGCTGTGGTCTGGCGATCACCTCCGGCCTCGCGTTGGGCATCGATGGCGTCTGCCAT
CAGCAGGCGCTGGCATCGGGCGGAATCACCCTGGCGGTGCTGGGATCCGGTCTGGATTGTCTCTACCCCAAGCGTCATCA
GGGGTTGGCGATGCAGATCCTCGAGCAGGAAGGTCTGCTTGTCTCCGAGTTGGCGCCCCAGCAAGGCCCCCTGGCTGAAC
ACTTCCCTCGCCGCAACCGTATCATCAGTGGTCTGTCGCTGGGGACACTGGTGGTGGAAGCGGCAGAACAGAGTGGTTCG
CTCATTACGGCCCGTTATGCGCTGGAGCAGGGCCGCGAGGTCTTTGCCGTTCCCGGCGCCCCGCAAAATGCACAGGCAGC
AGGGTGCAACCGTCTGCTTCAACAGGGTGCCAAGCTGGTCTTGAATGCCGCCGATATCCTGGAAGAGTTTCCAAGGCTGG
TCTTGCCCCCCGGACCAGTCAACGGTTCTTCCGAGGCGCAGCATAATAGCGAATTGCCTTATGCCGATTTGTTGGATAAC
GTAGATTATGAGACCACGAGCGTGGATACCGTTGCCGAACGGGCCCGGCTTCCTGTCGATGTCGTACTGGGCAGGTTGGT
AGAGCTGGAGCTGGTTGGTGCAGTGATGGCGGTAGCCGGTGGATACGTCAGAGCGAGGAGGGCGAATCATGTTTGA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (309-361)

• DNA recombination-mediator protein A (DNA_processg_A) (77-281)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Glaesserella parasuis strain SC1401	47.48	100	0.482
dprA	Vibrio campbellii strain DS40M4	47.397	98.383	0.466
dprA	Legionella pneumophila strain ERS1305867	44.413	96.496	0.429
dprA	Haemophilus influenzae Rd KW20	46.064	92.453	0.426
dprA	Vibrio cholerae strain A1552	49.837	82.749	0.412