Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA/comE1   Type   Machinery gene
Locus tag   QTV61_RS01530 Genome accession   NZ_CP128520
Coordinates   305683..306021 (-) Length   112 a.a.
NCBI ID   WP_006251644.1    Uniprot ID   A0A248ZWT2
Organism   Mannheimia haemolytica strain 191452     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 300683..311021
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QTV61_RS01515 - 300685..302154 (-) 1470 WP_006250002.1 class I SAM-dependent DNA methyltransferase -
  QTV61_RS01520 hsdR 302202..304553 (-) 2352 WP_006250003.1 EcoAI/FtnUII family type I restriction enzme subunit R -
  QTV61_RS01525 asd 304625..305518 (-) 894 WP_006250004.1 archaetidylserine decarboxylase -
  QTV61_RS01530 comEA/comE1 305683..306021 (-) 339 WP_006251644.1 ComEA family DNA-binding protein Machinery gene
  QTV61_RS01535 - 306314..307633 (+) 1320 WP_006253337.1 LysM-like peptidoglycan-binding domain-containing protein -
  QTV61_RS01540 - 307697..308113 (+) 417 WP_006250330.1 MliC family protein -
  QTV61_RS01545 waaF 308224..309261 (+) 1038 WP_006250331.1 lipopolysaccharide heptosyltransferase II -
  QTV61_RS01550 rfaC 309328..310287 (+) 960 WP_006250332.1 lipopolysaccharide heptosyltransferase RfaC -
  QTV61_RS01555 rpsL 310408..310782 (+) 375 WP_005543325.1 30S ribosomal protein S12 -

Sequence

Protein


Download         Length: 112 a.a.        Molecular weight: 12111.91 Da        Isoelectric Point: 10.0993

>NTDB_id=848278 QTV61_RS01530 WP_006251644.1 305683..306021(-) (comEA/comE1) [Mannheimia haemolytica strain 191452]
MKKIKQLGLTFLFGLNAMAFAQTPPTTMPVEQNAVTQPVQQTQITNANAVNINTASAAELQDKLVGIGQKKAQAIVDYRT
KNGNFKNIEQLAEVSGIGQATVEKNRANIILE

Nucleotide


Download         Length: 339 bp        

>NTDB_id=848278 QTV61_RS01530 WP_006251644.1 305683..306021(-) (comEA/comE1) [Mannheimia haemolytica strain 191452]
ATGAAGAAAATCAAACAACTTGGTCTAACATTCTTGTTTGGCTTAAATGCAATGGCTTTTGCCCAAACACCGCCAACTAC
AATGCCTGTTGAACAAAATGCAGTCACTCAACCCGTACAGCAAACACAAATCACCAACGCTAATGCGGTAAATATCAATA
CTGCTAGTGCTGCTGAATTGCAAGACAAGCTAGTGGGAATTGGGCAGAAAAAAGCTCAAGCGATTGTCGATTACCGTACT
AAAAACGGCAATTTTAAAAACATTGAGCAACTTGCTGAAGTCTCCGGAATTGGGCAAGCAACGGTAGAAAAAAATCGAGC
CAATATTATTTTAGAATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(46-109)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A248ZWT2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA/comE1 Glaesserella parasuis strain SC1401

59.292

100

0.598
  comE1/comEA Haemophilus influenzae Rd KW20

52.747

81.25

0.429
  comEA Vibrio cholerae C6706

54.651

76.786

0.42
  comEA Vibrio cholerae strain A1552

54.651

76.786

0.42