Detailed information
Bioinformatically predicted
Overview
| Name | comEC/celB | Type | Machinery gene |
| Locus tag | QSV38_RS02755 | Genome accession | NZ_CP128410 |
| Coordinates | 523627..525864 (-) | Length | 745 a.a. |
| NCBI ID | WP_277843313.1 | Uniprot ID | - |
| Organism | Streptococcus parasuis strain 7500 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 510943..547570 | 523627..525864 | within | 0 |
Gene organization within MGE regions
Location: 510943..547570
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QSV38_RS02670 (QSV38_02670) | - | 510943..511887 (-) | 945 | WP_277836751.1 | bifunctional oligoribonuclease/PAP phosphatase NrnA | - |
| QSV38_RS02675 (QSV38_02675) | - | 511982..512443 (+) | 462 | WP_217374881.1 | flavodoxin | - |
| QSV38_RS02680 (QSV38_02680) | rpsN | 512619..512849 (+) | 231 | WP_254451638.1 | 30S ribosomal protein S14 | - |
| QSV38_RS02685 (QSV38_02685) | - | 512931..513206 (+) | 276 | WP_130554325.1 | chorismate mutase | - |
| QSV38_RS02690 (QSV38_02690) | - | 513199..514383 (+) | 1185 | WP_277843328.1 | chloride channel protein | - |
| QSV38_RS02695 (QSV38_02695) | - | 514569..514829 (-) | 261 | WP_289649094.1 | hypothetical protein | - |
| QSV38_RS02700 (QSV38_02700) | - | 514864..515052 (-) | 189 | Protein_536 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| QSV38_RS02705 (QSV38_02705) | - | 515232..515381 (+) | 150 | WP_274504714.1 | hypothetical protein | - |
| QSV38_RS02710 (QSV38_02710) | - | 515383..515709 (+) | 327 | WP_289649367.1 | hypothetical protein | - |
| QSV38_RS02715 (QSV38_02715) | - | 515847..516674 (+) | 828 | WP_289649095.1 | site-specific integrase | - |
| QSV38_RS02725 (QSV38_02725) | - | 516846..517520 (-) | 675 | WP_217375147.1 | hydrolase | - |
| QSV38_RS02730 (QSV38_02730) | - | 517554..519299 (-) | 1746 | WP_289649096.1 | ABC transporter ATP-binding protein | - |
| QSV38_RS02735 (QSV38_02735) | - | 519289..521028 (-) | 1740 | WP_217374837.1 | ABC transporter transmembrane domain-containing protein | - |
| QSV38_RS02740 (QSV38_02740) | rplS | 521301..521648 (-) | 348 | WP_011921928.1 | 50S ribosomal protein L19 | - |
| QSV38_RS02745 (QSV38_02745) | sodA | 521850..522455 (-) | 606 | WP_217374836.1 | superoxide dismutase | - |
| QSV38_RS02750 (QSV38_02750) | holA | 522532..523563 (-) | 1032 | WP_277843315.1 | DNA polymerase III subunit delta | - |
| QSV38_RS02755 (QSV38_02755) | comEC/celB | 523627..525864 (-) | 2238 | WP_277843313.1 | DNA internalization-related competence protein ComEC/Rec2 | Machinery gene |
| QSV38_RS02760 (QSV38_02760) | - | 525848..526525 (-) | 678 | WP_274504678.1 | helix-hairpin-helix domain-containing protein | - |
| QSV38_RS02765 (QSV38_02765) | - | 526591..527334 (-) | 744 | WP_289649115.1 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | - |
| QSV38_RS02770 (QSV38_02770) | - | 527426..528175 (+) | 750 | WP_130554335.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| QSV38_RS02775 (QSV38_02775) | - | 528165..528437 (+) | 273 | WP_105127437.1 | GIY-YIG nuclease family protein | - |
| QSV38_RS02780 (QSV38_02780) | - | 528455..529066 (-) | 612 | WP_289649117.1 | NAD(P)H-dependent oxidoreductase | - |
| QSV38_RS02785 (QSV38_02785) | - | 529187..529593 (-) | 407 | Protein_552 | GNAT family N-acetyltransferase | - |
| QSV38_RS02790 (QSV38_02790) | - | 529705..530307 (-) | 603 | WP_289649118.1 | DUF1648 domain-containing protein | - |
| QSV38_RS02795 (QSV38_02795) | - | 530294..530572 (-) | 279 | WP_105136884.1 | autorepressor SdpR family transcription factor | - |
| QSV38_RS02800 (QSV38_02800) | - | 530719..532344 (-) | 1626 | WP_277836759.1 | DEAD/DEAH box helicase | - |
| QSV38_RS02805 (QSV38_02805) | - | 532630..533013 (-) | 384 | WP_217374827.1 | PH domain-containing protein | - |
| QSV38_RS02810 (QSV38_02810) | - | 533208..533473 (-) | 266 | Protein_557 | 16S rRNA pseudouridine(516) synthase | - |
| QSV38_RS02815 (QSV38_02815) | - | 533499..534167 (-) | 669 | WP_277843299.1 | hypothetical protein | - |
| QSV38_RS02820 (QSV38_02820) | - | 534169..535713 (-) | 1545 | WP_277843297.1 | peptide chain release factor 3 | - |
| QSV38_RS02825 (QSV38_02825) | murF | 535884..537248 (-) | 1365 | WP_277843295.1 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase | - |
| QSV38_RS02830 (QSV38_02830) | - | 537303..537971 (-) | 669 | WP_277843294.1 | ABC transporter ATP-binding protein | - |
| QSV38_RS02835 (QSV38_02835) | - | 537981..539057 (-) | 1077 | WP_289649119.1 | ABC transporter permease | - |
| QSV38_RS02840 (QSV38_02840) | - | 539059..539439 (-) | 381 | WP_172025425.1 | OsmC family protein | - |
| QSV38_RS02845 (QSV38_02845) | - | 539552..540598 (-) | 1047 | WP_277836762.1 | D-alanine--D-alanine ligase | - |
| QSV38_RS02850 (QSV38_02850) | recR | 540707..541303 (-) | 597 | WP_172036408.1 | recombination mediator RecR | - |
| QSV38_RS02855 (QSV38_02855) | pbp2b | 541312..543387 (-) | 2076 | WP_277843290.1 | penicillin-binding protein PBP2B | - |
| QSV38_RS02860 (QSV38_02860) | vicX | 543663..544466 (-) | 804 | WP_217374822.1 | MBL fold metallo-hydrolase | Regulator |
| QSV38_RS02865 (QSV38_02865) | micB | 544473..545822 (-) | 1350 | WP_217469406.1 | cell wall metabolism sensor histidine kinase VicK | Regulator |
| QSV38_RS02870 (QSV38_02870) | micA | 545815..546519 (-) | 705 | WP_024391260.1 | response regulator YycF | Regulator |
| QSV38_RS02875 (QSV38_02875) | - | 546809..547570 (+) | 762 | WP_130554350.1 | amino acid ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 745 a.a. Molecular weight: 84449.76 Da Isoelectric Point: 6.9942
>NTDB_id=847296 QSV38_RS02755 WP_277843313.1 523627..525864(-) (comEC/celB) [Streptococcus parasuis strain 7500]
MSRLIRLPCQPIHFAVLAVLAYFAVHSFSLLTMSLLSLLLAVFRLRQGKVVFIKTLPLLALCGLFFGCQKIQWERTNQWA
PEQVTTVQVIPDTIDVNGDSLSFRGRAEGQVFQVFYKVASQEEQTYFHELTDLVQLEVDAEVCQPAGQRNFNGFDYQAYL
KTQGIYRTVKISTINNILPVHSWNIFDWLSTWRRQALVYIKSHFPAPMSHYMTGLLLGELDSDFDQMSDLYSSLGIIHLF
ALSGMQVGFFIDKFRWLLLRLGLTKETVDKLQIPFSLIYAGLTGFSVSVVRSLVQKILGNLGLRKLDNFAATVFVCLLLM
PRFLLTAGGVLTFTYALLLTVFDFEELGQLKKIAMESLSISLGILPVLMTYFFAFQPLSILLTFVFSFVFDVLLLPGLSV
ILLLSPFIKITWVNGFFILMEKIIVWVAELGIRPWILGKPTGLVFLLLLFCLFLLYDFHREKKWLLGLSLILALLFFITK
HPLENEVTVVDVGQGDSIFLRDIRGRTVLIDVGGRVDFAAKEAWRERAREANAERTLIPYLHSRGVDRIDDLVLTHTDAD
HVGDVLELAKQIQIGKIYVSPGSLTVPDFVATLRRINVPVHVVNPGDRLPIFDSYLEVLYPNRIGDGGNNDSIVLYGRLL
KMNFLFTGDLEQGELDLITSYPQLPVDVLKAGHHGSKGSSYPEFLDHIGAKIALISAGEDNRYQHPHKETLERLDSQNMQ
VYRTDLQGAIRLRGWKQWSIETVKE
MSRLIRLPCQPIHFAVLAVLAYFAVHSFSLLTMSLLSLLLAVFRLRQGKVVFIKTLPLLALCGLFFGCQKIQWERTNQWA
PEQVTTVQVIPDTIDVNGDSLSFRGRAEGQVFQVFYKVASQEEQTYFHELTDLVQLEVDAEVCQPAGQRNFNGFDYQAYL
KTQGIYRTVKISTINNILPVHSWNIFDWLSTWRRQALVYIKSHFPAPMSHYMTGLLLGELDSDFDQMSDLYSSLGIIHLF
ALSGMQVGFFIDKFRWLLLRLGLTKETVDKLQIPFSLIYAGLTGFSVSVVRSLVQKILGNLGLRKLDNFAATVFVCLLLM
PRFLLTAGGVLTFTYALLLTVFDFEELGQLKKIAMESLSISLGILPVLMTYFFAFQPLSILLTFVFSFVFDVLLLPGLSV
ILLLSPFIKITWVNGFFILMEKIIVWVAELGIRPWILGKPTGLVFLLLLFCLFLLYDFHREKKWLLGLSLILALLFFITK
HPLENEVTVVDVGQGDSIFLRDIRGRTVLIDVGGRVDFAAKEAWRERAREANAERTLIPYLHSRGVDRIDDLVLTHTDAD
HVGDVLELAKQIQIGKIYVSPGSLTVPDFVATLRRINVPVHVVNPGDRLPIFDSYLEVLYPNRIGDGGNNDSIVLYGRLL
KMNFLFTGDLEQGELDLITSYPQLPVDVLKAGHHGSKGSSYPEFLDHIGAKIALISAGEDNRYQHPHKETLERLDSQNMQ
VYRTDLQGAIRLRGWKQWSIETVKE
Nucleotide
Download Length: 2238 bp
>NTDB_id=847296 QSV38_RS02755 WP_277843313.1 523627..525864(-) (comEC/celB) [Streptococcus parasuis strain 7500]
ATGTCACGGTTGATTAGACTCCCCTGTCAGCCCATTCACTTTGCAGTTTTGGCGGTGTTAGCCTACTTTGCCGTTCACTC
TTTTTCCCTTTTGACAATGAGCCTGCTGAGTCTGTTACTAGCAGTCTTTAGGCTTCGGCAAGGAAAGGTGGTCTTCATCA
AAACGCTACCGCTTCTAGCCTTATGTGGTCTCTTCTTCGGATGTCAGAAGATACAATGGGAGCGGACAAATCAATGGGCT
CCAGAGCAAGTGACAACTGTGCAGGTTATTCCTGATACCATTGATGTCAACGGAGACAGTCTATCTTTTCGTGGTCGGGC
TGAAGGTCAAGTTTTTCAGGTTTTCTATAAAGTTGCAAGTCAGGAAGAACAAACCTACTTTCATGAGCTTACGGACTTGG
TGCAGTTAGAGGTAGATGCAGAAGTTTGCCAACCAGCAGGTCAACGTAATTTCAATGGTTTTGATTATCAGGCTTATCTC
AAAACCCAGGGCATCTATCGGACAGTAAAAATAAGTACCATTAACAATATTCTCCCTGTTCATTCTTGGAATATCTTTGA
CTGGTTGTCAACCTGGCGGAGGCAGGCTCTCGTTTATATCAAATCTCATTTTCCTGCTCCCATGAGCCACTACATGACTG
GATTACTATTGGGAGAGTTAGATAGTGACTTTGACCAAATGAGTGACCTCTATTCTAGTTTAGGGATCATTCATCTTTTT
GCCCTGTCTGGGATGCAGGTTGGTTTTTTCATTGACAAATTTCGCTGGCTTTTATTGCGTTTGGGTTTAACAAAGGAAAC
TGTCGATAAACTTCAAATTCCGTTTTCTCTTATTTATGCAGGATTAACAGGATTTTCAGTATCAGTCGTGCGGTCCTTGG
TCCAGAAAATTCTTGGTAATCTCGGGCTACGAAAATTGGATAATTTTGCAGCAACTGTCTTTGTTTGTCTCTTGCTTATG
CCACGTTTTCTTCTGACAGCAGGAGGTGTGCTGACATTTACCTATGCTTTGTTATTGACAGTCTTTGATTTTGAAGAGCT
AGGGCAGCTAAAAAAGATAGCAATGGAGAGTCTGAGTATTTCTCTTGGGATTTTACCGGTCTTGATGACCTATTTTTTTG
CCTTTCAGCCCTTATCAATCCTTTTAACGTTTGTTTTTTCCTTTGTTTTTGATGTGTTGTTGTTACCTGGGCTATCTGTC
ATTCTTTTACTATCGCCCTTCATTAAAATTACGTGGGTCAACGGATTCTTTATCCTTATGGAAAAGATTATTGTATGGGT
GGCAGAATTGGGGATTCGACCTTGGATTTTAGGAAAACCTACGGGCCTTGTCTTTTTGCTCTTGCTGTTCTGCCTTTTCT
TGCTTTATGATTTTCACAGAGAGAAGAAATGGCTCCTTGGATTGAGTCTGATCCTTGCTCTGCTATTTTTCATAACCAAA
CACCCGCTGGAAAATGAGGTGACGGTGGTAGACGTAGGGCAGGGGGATAGTATCTTTTTGCGGGACATTCGGGGGCGGAC
GGTTCTGATTGATGTGGGTGGTCGGGTTGACTTTGCTGCAAAGGAAGCTTGGCGGGAGCGGGCTAGGGAAGCAAATGCGG
AGCGAACACTGATTCCTTACCTGCATAGTCGAGGTGTGGATCGGATTGATGATTTGGTTCTGACCCATACCGATGCAGAT
CATGTGGGTGATGTGCTAGAATTGGCTAAGCAGATTCAAATAGGTAAGATTTACGTTTCTCCAGGTAGTTTGACTGTACC
AGATTTTGTTGCGACTTTGAGGAGAATAAATGTCCCTGTTCATGTTGTAAATCCTGGAGATCGATTGCCCATTTTTGATT
CCTATCTAGAAGTTCTATATCCCAATAGAATCGGAGATGGAGGCAATAATGACTCAATTGTACTCTATGGTCGTTTGTTA
AAAATGAATTTTCTCTTTACCGGTGACTTGGAGCAAGGGGAATTAGATTTAATCACTTCTTATCCGCAGCTACCAGTCGA
TGTGCTGAAAGCAGGTCACCATGGTTCCAAGGGCTCTTCATATCCAGAATTTTTAGACCATATTGGAGCAAAAATTGCTC
TGATTTCTGCTGGTGAAGATAATCGCTATCAACATCCACATAAGGAAACTCTGGAACGTCTTGACAGTCAAAATATGCAG
GTTTACCGAACGGATCTGCAAGGAGCAATCCGTTTACGAGGTTGGAAACAGTGGAGTATTGAAACGGTAAAAGAGTGA
ATGTCACGGTTGATTAGACTCCCCTGTCAGCCCATTCACTTTGCAGTTTTGGCGGTGTTAGCCTACTTTGCCGTTCACTC
TTTTTCCCTTTTGACAATGAGCCTGCTGAGTCTGTTACTAGCAGTCTTTAGGCTTCGGCAAGGAAAGGTGGTCTTCATCA
AAACGCTACCGCTTCTAGCCTTATGTGGTCTCTTCTTCGGATGTCAGAAGATACAATGGGAGCGGACAAATCAATGGGCT
CCAGAGCAAGTGACAACTGTGCAGGTTATTCCTGATACCATTGATGTCAACGGAGACAGTCTATCTTTTCGTGGTCGGGC
TGAAGGTCAAGTTTTTCAGGTTTTCTATAAAGTTGCAAGTCAGGAAGAACAAACCTACTTTCATGAGCTTACGGACTTGG
TGCAGTTAGAGGTAGATGCAGAAGTTTGCCAACCAGCAGGTCAACGTAATTTCAATGGTTTTGATTATCAGGCTTATCTC
AAAACCCAGGGCATCTATCGGACAGTAAAAATAAGTACCATTAACAATATTCTCCCTGTTCATTCTTGGAATATCTTTGA
CTGGTTGTCAACCTGGCGGAGGCAGGCTCTCGTTTATATCAAATCTCATTTTCCTGCTCCCATGAGCCACTACATGACTG
GATTACTATTGGGAGAGTTAGATAGTGACTTTGACCAAATGAGTGACCTCTATTCTAGTTTAGGGATCATTCATCTTTTT
GCCCTGTCTGGGATGCAGGTTGGTTTTTTCATTGACAAATTTCGCTGGCTTTTATTGCGTTTGGGTTTAACAAAGGAAAC
TGTCGATAAACTTCAAATTCCGTTTTCTCTTATTTATGCAGGATTAACAGGATTTTCAGTATCAGTCGTGCGGTCCTTGG
TCCAGAAAATTCTTGGTAATCTCGGGCTACGAAAATTGGATAATTTTGCAGCAACTGTCTTTGTTTGTCTCTTGCTTATG
CCACGTTTTCTTCTGACAGCAGGAGGTGTGCTGACATTTACCTATGCTTTGTTATTGACAGTCTTTGATTTTGAAGAGCT
AGGGCAGCTAAAAAAGATAGCAATGGAGAGTCTGAGTATTTCTCTTGGGATTTTACCGGTCTTGATGACCTATTTTTTTG
CCTTTCAGCCCTTATCAATCCTTTTAACGTTTGTTTTTTCCTTTGTTTTTGATGTGTTGTTGTTACCTGGGCTATCTGTC
ATTCTTTTACTATCGCCCTTCATTAAAATTACGTGGGTCAACGGATTCTTTATCCTTATGGAAAAGATTATTGTATGGGT
GGCAGAATTGGGGATTCGACCTTGGATTTTAGGAAAACCTACGGGCCTTGTCTTTTTGCTCTTGCTGTTCTGCCTTTTCT
TGCTTTATGATTTTCACAGAGAGAAGAAATGGCTCCTTGGATTGAGTCTGATCCTTGCTCTGCTATTTTTCATAACCAAA
CACCCGCTGGAAAATGAGGTGACGGTGGTAGACGTAGGGCAGGGGGATAGTATCTTTTTGCGGGACATTCGGGGGCGGAC
GGTTCTGATTGATGTGGGTGGTCGGGTTGACTTTGCTGCAAAGGAAGCTTGGCGGGAGCGGGCTAGGGAAGCAAATGCGG
AGCGAACACTGATTCCTTACCTGCATAGTCGAGGTGTGGATCGGATTGATGATTTGGTTCTGACCCATACCGATGCAGAT
CATGTGGGTGATGTGCTAGAATTGGCTAAGCAGATTCAAATAGGTAAGATTTACGTTTCTCCAGGTAGTTTGACTGTACC
AGATTTTGTTGCGACTTTGAGGAGAATAAATGTCCCTGTTCATGTTGTAAATCCTGGAGATCGATTGCCCATTTTTGATT
CCTATCTAGAAGTTCTATATCCCAATAGAATCGGAGATGGAGGCAATAATGACTCAATTGTACTCTATGGTCGTTTGTTA
AAAATGAATTTTCTCTTTACCGGTGACTTGGAGCAAGGGGAATTAGATTTAATCACTTCTTATCCGCAGCTACCAGTCGA
TGTGCTGAAAGCAGGTCACCATGGTTCCAAGGGCTCTTCATATCCAGAATTTTTAGACCATATTGGAGCAAAAATTGCTC
TGATTTCTGCTGGTGAAGATAATCGCTATCAACATCCACATAAGGAAACTCTGGAACGTCTTGACAGTCAAAATATGCAG
GTTTACCGAACGGATCTGCAAGGAGCAATCCGTTTACGAGGTTGGAAACAGTGGAGTATTGAAACGGTAAAAGAGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEC/celB | Streptococcus mitis SK321 |
53.672 |
100 |
0.54 |
| comEC/celB | Streptococcus mitis NCTC 12261 |
52.589 |
98.523 |
0.518 |
| comEC/celB | Streptococcus pneumoniae TIGR4 |
51.817 |
99.732 |
0.517 |
| comEC/celB | Streptococcus pneumoniae Rx1 |
51.279 |
99.732 |
0.511 |
| comEC/celB | Streptococcus pneumoniae D39 |
51.279 |
99.732 |
0.511 |
| comEC/celB | Streptococcus pneumoniae R6 |
51.279 |
99.732 |
0.511 |
| comEC | Lactococcus lactis subsp. cremoris KW2 |
47.397 |
100 |
0.477 |