Detailed information NTG0845988

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: QRD88_RS16280
• Genome accession: NZ_CP128114
• Coordinates: 3140409..3141584 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus safensis strain G6S3
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3135409..3146584

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QRD88_RS16250 (QRD88_16245)	-	3135578..3135997 (-)	420	WP_024423621.1	TIGR03826 family flagellar region protein	-
QRD88_RS16255 (QRD88_16250)	comFC	3136054..3136710 (-)	657	WP_241218534.1	ComF family protein	Machinery gene
QRD88_RS16260 (QRD88_16255)	-	3136737..3137030 (-)	294	WP_025093967.1	competence protein ComFB	-
QRD88_RS16265 (QRD88_16260)	comFA	3137079..3138476 (-)	1398	WP_286099159.1	DEAD/DEAH box helicase	Machinery gene
QRD88_RS16270 (QRD88_16265)	-	3138597..3139439 (-)	843	WP_024423625.1	DegV family protein	-
QRD88_RS16275 (QRD88_16270)	degU	3139655..3140344 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
QRD88_RS16280 (QRD88_16275)	degS	3140409..3141584 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
QRD88_RS16285 (QRD88_16280)	-	3141805..3142473 (+)	669	WP_012011434.1	YigZ family protein	-
QRD88_RS16290 (QRD88_16285)	-	3142458..3143549 (+)	1092	WP_024423626.1	LCP family protein	-
QRD88_RS16295 (QRD88_16290)	-	3143585..3144652 (-)	1068	WP_024423627.1	MraY family glycosyltransferase	-
QRD88_RS16300 (QRD88_16295)	-	3144787..3145983 (-)	1197	WP_286099160.1	glycosyltransferase	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=845988 QRD88_RS16280 WP_003213166.1 3140409..3141584(-) (degS) [Bacillus safensis strain G6S3]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=845988 QRD88_RS16280 WP_003213166.1 3140409..3141584(-) (degS) [Bacillus safensis strain G6S3]
ATGACAACACCCAAAATGGATCCGAAATTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGCAAGGA
CGAAGTATTTAGAATAGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTGAAGCAAATCAAACAGCAAG
TAAACGAAGTAATTGATTTTGGGGATAAGCTGGAAGTCCATACAAGACATGCTAGAAACCGCTTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGTGAGGCCTACGAAAAAGCACATAACTTGCAAGTGGAACTCACCATGAT
TCAGCAGCGCGAGAAGCAGCTGAGAGAAAGAAGAGACGATCTGGAAAGACGATTATTAAGCTTACAAGACGTCATTGAAC
GTTCTGAAACGCTTGTGAGTCAGATTACAGTTGTTCTCAACTATCTCAATCAGGATTTACGCCAGGTTGGCGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGGCTGAGAATTATTGAAGCTCAAGAAGAAGAACGCAAAAGAGTGTCTCGGGA
AATTCATGACGGCCCTGCTCAAATGCTGGCAAACGTGATGATGCGTTCCGAATTAATTGAACGTATTTTTAGAGACCGCG
GTACAGAAGAAGGTTTTAAAGAAATTAGAAGTCTCAGACAAAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTGATTCCGACACTGAGAAAATACTTAAACACAATTGAAGAATA
TGATGGGAAAACCAAAATTACGTTCCAATGCCTAGGTGATACAGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTAGCAC
TGTTTAGACTAGCTCAAGAAGCTGTCACAAATTCATTAAAGCATTCTGAAGCGGAAGAAATCTCTGTCAAAGTAGAAGTA
ACGAAAGACTTTGTGACCTTAATTATTAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTGAAAACAAACAAAAACAA
ATCCTTCGGTTTACTTGGCATGAAAGAACGCGTAGACTTACTGGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTCGCGTGCCACTAACATTGCAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841