Detailed information NTG0845603

Bioinformatically predicted

Overview

• Name: htrA
• Type: Regulator
• Locus tag: VXF94_RS11250
• Genome accession: NZ_CP143956
• Coordinates: 2200012..2201208 (+)
• Length: 398 a.a.
• NCBI ID: WP_014472400.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain Fad 108
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2195012..2206208

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VXF94_RS11230 (VXF94_11230)	walK	2195106..2196941 (+)	1836	WP_014471295.1	cell wall metabolism sensor histidine kinase WalK	-
VXF94_RS11235 (VXF94_11235)	yycH	2196931..2198289 (+)	1359	WP_014471294.1	two-component system activity regulator YycH	-
VXF94_RS11240 (VXF94_11240)	-	2198276..2199115 (+)	840	WP_014472401.1	two-component system regulatory protein YycI	-
VXF94_RS11245 (VXF94_11245)	vicX	2199131..2199925 (+)	795	WP_013354215.1	MBL fold metallo-hydrolase	Regulator
VXF94_RS11250 (VXF94_11250)	htrA	2200012..2201208 (+)	1197	WP_014472400.1	S1C family serine protease	Regulator
VXF94_RS11255 (VXF94_11255)	-	2201581..2202492 (-)	912	WP_013354213.1	PepSY domain-containing protein	-
VXF94_RS11260 (VXF94_11260)	-	2202706..2203389 (+)	684	WP_013354212.1	response regulator transcription factor	-
VXF94_RS11265 (VXF94_11265)	-	2203386..2204804 (+)	1419	WP_014471292.1	sensor histidine kinase	-
VXF94_RS11270 (VXF94_11270)	-	2204983..2205246 (+)	264	WP_013354210.1	hypothetical protein	-

Sequence

Protein

• Length: 398 a.a.
• Molecular weight: 42681.63 Da
• Isoelectric Point: 6.9878

>NTDB_id=845603 VXF94_RS11250 WP_014472400.1 2200012..2201208(+) (htrA) [Bacillus amyloliquefaciens strain Fad 108]
MDYNRDDEQYAPEQPCRSKRGYFLSSLIGVIVGAALMGLLLPYWTGGDHGESSKSANQRIGSEQVKTVNVNINDAVTNMV
SRVSDSVVGVLNIQKTDIWGEGGEAGSGSGVIYKKNGNTSYIVTNHHVIEGATEIEISLKDDSRVPAELIGSDRLMDLAV
LKVKTDKIKSVAQFGNSDQVKVGEPVIAIGNPLGLEFAGSVTQGIISGTERAVPVDSNGDGQPDWNAEVLQTDAAINPGN
SGGALMDISGKVVGINSMKIAESAVEGIGLSIPSKLVIPVIQDLEKYGEVRRPFLGIEMKSLTDIASYHWSQTLKLPKGV
KTGAVIMGVDAFSPAGKAGLKKLDVITGFDGHKVNDIVDLRERLYRKKIGDRVKITFYRSGKKKTAEVKLTEADRLQK

Nucleotide

• Length: 1197 bp

>NTDB_id=845603 VXF94_RS11250 WP_014472400.1 2200012..2201208(+) (htrA) [Bacillus amyloliquefaciens strain Fad 108]
GTGGATTATAATCGCGATGATGAACAGTACGCCCCCGAGCAGCCCTGCCGCAGCAAGAGAGGATACTTCCTTTCAAGTCT
GATCGGTGTCATCGTCGGGGCCGCGCTCATGGGTTTACTGCTGCCGTACTGGACAGGCGGAGACCATGGAGAAAGCAGCA
AAAGCGCCAATCAGCGCATCGGCAGCGAACAGGTGAAAACAGTCAACGTAAATATCAATGATGCTGTCACGAATATGGTC
AGCCGTGTATCGGATTCGGTAGTCGGCGTTCTCAATATCCAAAAGACCGATATTTGGGGAGAGGGCGGCGAAGCGGGAAG
CGGGTCCGGCGTCATTTACAAAAAGAACGGAAACACTTCTTATATCGTAACCAATCACCATGTCATTGAAGGTGCGACTG
AAATTGAGATCAGCCTGAAAGATGACTCGCGCGTGCCTGCCGAGCTGATCGGGAGCGACCGTCTGATGGATCTTGCCGTG
TTGAAGGTGAAGACTGATAAAATCAAATCGGTCGCCCAATTCGGCAATTCTGATCAAGTGAAAGTTGGCGAGCCGGTCAT
TGCGATCGGAAACCCGCTCGGACTTGAATTTGCGGGATCGGTGACACAAGGGATCATTTCAGGAACGGAAAGGGCGGTTC
CCGTTGACTCAAACGGCGACGGACAGCCTGATTGGAATGCGGAAGTGCTGCAGACCGACGCCGCGATTAATCCCGGCAAC
AGCGGCGGCGCTTTGATGGATATATCGGGCAAGGTGGTCGGCATCAACTCAATGAAGATTGCTGAATCCGCCGTTGAAGG
AATCGGCCTGTCCATCCCGTCAAAGCTTGTCATTCCCGTTATTCAGGATTTAGAAAAATACGGAGAAGTCAGACGGCCTT
TCCTCGGTATTGAGATGAAATCTTTAACGGATATTGCGAGCTACCATTGGAGCCAGACGCTCAAACTTCCGAAGGGTGTT
AAAACCGGAGCGGTCATTATGGGTGTCGACGCGTTTTCACCGGCTGGAAAAGCAGGCTTGAAAAAGCTCGACGTGATCAC
CGGATTCGACGGACATAAGGTCAATGACATTGTCGATCTCCGTGAGCGTCTGTATCGCAAAAAGATCGGCGACCGTGTCA
AGATCACGTTCTACCGTTCAGGAAAGAAAAAAACAGCGGAAGTCAAACTGACAGAAGCGGATCGATTGCAGAAATAA

Domains

Predicted by InterProScan.

• Peptidase family M50 (Peptidase_M50) (323-394)

• Trypsin-like peptidase domain (Trypsin_2) (108-255)

• PDZ domain (PDZ_2) (293-390)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
htrA	Streptococcus mutans UA159	43.687	99.497	0.435
htrA	Streptococcus gordonii str. Challis substr. CH1	41.602	97.236	0.405
htrA	Streptococcus mitis NCTC 12261	40.26	96.734	0.389