Detailed information    

insolico Bioinformatically predicted

Overview

Name   dprA   Type   Machinery gene
Locus tag   QSG83_RS14850 Genome accession   NZ_CP127892
Coordinates   2868545..2869768 (+) Length   407 a.a.
NCBI ID   WP_317028083.1    Uniprot ID   -
Organism   Acinetobacter towneri strain SAAt401     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 2863545..2874768
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QSG83_RS14830 (QSG83_14840) - 2864071..2866110 (-) 2040 WP_317028081.1 TonB-dependent copper receptor -
  QSG83_RS14835 (QSG83_14845) - 2866174..2866602 (-) 429 WP_104853276.1 DUF2946 family protein -
  QSG83_RS14840 (QSG83_14850) def 2866718..2867248 (-) 531 WP_004970115.1 peptide deformylase -
  QSG83_RS14845 (QSG83_14855) tsaP 2867370..2868527 (+) 1158 WP_317028082.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  QSG83_RS14850 (QSG83_14860) dprA 2868545..2869768 (+) 1224 WP_317028083.1 DNA-processing protein DprA Machinery gene
  QSG83_RS14855 (QSG83_14865) - 2869817..2870386 (+) 570 WP_253107206.1 L-threonylcarbamoyladenylate synthase -
  QSG83_RS14860 (QSG83_14870) - 2870421..2871477 (-) 1057 Protein_2664 RNA-guided endonuclease InsQ/TnpB family protein -
  QSG83_RS14865 (QSG83_14875) - 2871609..2871902 (+) 294 WP_228258776.1 hypothetical protein -
  QSG83_RS14870 (QSG83_14880) - 2871987..2872895 (-) 909 WP_317028084.1 DMT family transporter -
  QSG83_RS14875 (QSG83_14885) - 2873181..2873726 (+) 546 WP_004970127.1 glutathione peroxidase -
  QSG83_RS14880 (QSG83_14890) - 2874051..2874641 (+) 591 WP_178319011.1 hypothetical protein -

Sequence

Protein


Download         Length: 407 a.a.        Molecular weight: 45090.16 Da        Isoelectric Point: 6.6802

>NTDB_id=845112 QSG83_RS14850 WP_317028083.1 2868545..2869768(+) (dprA) [Acinetobacter towneri strain SAAt401]
MLNSFSPQQINYILLWYLVQHSLSSFSKLVQHYGSVATAVQPEHLLTWSDVRIHANHLQRAKEYLSPTGQLAFEQCLNQL
QQQCDFILTLDDADYPNQLRPYSNKPPILFGQGNAQALLQAQIAIVGSRKASPHGRQVAYDFAYYLSEQGFFINSGLAQG
IDEAAHQGALQHQRTIAVMGTGLDSTYPSAHHSLRQQIVECGGAVITEFLPQTKPLQQHFPRRNRIVSGLSLGVIVAEAS
LNSGSLITAKLAAEQGKLIFAIPGHIYSEFHQGCHQLIREGAILVDHPEQVIEDLALPTQWQYQQNQIASSQNQTTAAST
KAKLSTPPTEAILQTTTTKTADTSTPHIPEHLLALYQQLDWVGQSIDHLAQQLNLDIATLTSALMELELMGFCLQQSGLY
LRCRPLK

Nucleotide


Download         Length: 1224 bp        

>NTDB_id=845112 QSG83_RS14850 WP_317028083.1 2868545..2869768(+) (dprA) [Acinetobacter towneri strain SAAt401]
ATGTTGAATTCATTCAGCCCACAGCAAATCAACTACATTTTGTTGTGGTATTTGGTTCAACATTCACTGTCTAGTTTTTC
CAAACTCGTACAACATTATGGTTCCGTGGCTACCGCAGTGCAGCCCGAACACCTCCTCACATGGTCAGATGTGCGCATTC
ATGCCAACCATCTACAACGCGCCAAAGAATATCTCAGCCCAACAGGGCAACTCGCCTTTGAACAATGTCTGAATCAACTG
CAACAGCAGTGCGATTTTATTCTAACTTTGGACGATGCGGACTATCCCAATCAGTTACGACCCTATTCCAACAAGCCACC
CATTTTATTTGGGCAAGGCAATGCACAGGCTTTGTTGCAAGCGCAAATTGCGATTGTCGGCAGTCGCAAAGCCAGCCCGC
ATGGTCGGCAAGTGGCTTATGATTTTGCTTATTATTTAAGTGAACAAGGGTTCTTTATCAATAGTGGTTTGGCACAAGGT
ATTGATGAAGCCGCACATCAAGGTGCTTTGCAACATCAACGTACCATTGCAGTCATGGGCACAGGTTTGGACAGCACTTA
TCCAAGTGCACATCACAGCCTGCGCCAACAAATTGTGGAATGTGGTGGTGCCGTGATTACAGAGTTTTTACCGCAGACCA
AACCTTTACAGCAACATTTTCCACGACGTAACCGTATTGTCAGTGGACTAAGTTTAGGCGTGATTGTTGCTGAAGCCAGT
TTAAATAGTGGCTCACTGATTACCGCGAAATTGGCGGCAGAGCAAGGCAAATTAATTTTTGCCATTCCAGGACATATTTA
CAGTGAATTTCATCAAGGTTGCCACCAATTGATTCGTGAAGGTGCAATTTTAGTGGATCATCCTGAACAAGTGATTGAAG
ATTTAGCCCTACCCACCCAATGGCAATATCAACAAAACCAAATAGCATCAAGCCAAAATCAGACTACAGCAGCTTCAACA
AAAGCAAAATTATCTACACCACCGACTGAAGCAATACTTCAAACCACCACAACAAAAACAGCAGATACAAGTACACCGCA
TATTCCCGAGCATTTATTGGCACTGTATCAACAACTGGATTGGGTCGGACAAAGCATCGATCACTTGGCACAGCAACTGA
ATTTAGATATTGCCACACTCACCAGCGCATTAATGGAACTGGAACTCATGGGCTTCTGTTTACAACAATCAGGTTTATAT
CTGCGTTGTCGTCCACTCAAATAA

Domains

Predicted by InterproScan.

DNA recombination-mediator protein A (DNA_processg_A)

(87-286)

DprA winged helix domain (DprA_WH)

(353-398)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

62.129

99.263

0.617
  dprA Acinetobacter baumannii D1279779

61.634

99.263

0.612
  dprA Acinetobacter baylyi ADP1

58.663

99.263

0.582