Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   QLQ02_RS12040 Genome accession   NZ_CP127833
Coordinates   2389996..2390640 (+) Length   214 a.a.
NCBI ID   WP_010331690.1    Uniprot ID   -
Organism   Bacillus mojavensis strain KRS009     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2384996..2395640
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QLQ02_RS12015 - 2385383..2385751 (-) 369 WP_268447270.1 hypothetical protein -
  QLQ02_RS12020 degQ 2386212..2386352 (+) 141 WP_286058042.1 degradation enzyme regulation protein DegQ Regulator
  QLQ02_RS12025 comQ 2386537..2387439 (+) 903 WP_286059841.1 polyprenyl synthetase family protein Regulator
  QLQ02_RS12030 comX 2387423..2387590 (+) 168 WP_044158946.1 competence pheromone ComX Regulator
  QLQ02_RS12035 comP 2387606..2389915 (+) 2310 WP_286059843.1 two-component system sensor histidine kinase ComP Regulator
  QLQ02_RS12040 comA 2389996..2390640 (+) 645 WP_010331690.1 two-component system response regulator ComA Regulator
  QLQ02_RS12045 - 2390658..2391038 (+) 381 WP_229149090.1 hotdog fold thioesterase -
  QLQ02_RS12050 mnhG 2391077..2391451 (-) 375 WP_010331688.1 monovalent cation/H(+) antiporter subunit G -
  QLQ02_RS12055 - 2391435..2391719 (-) 285 WP_286058043.1 Na(+)/H(+) antiporter subunit F1 -
  QLQ02_RS12060 - 2391719..2392195 (-) 477 WP_010331686.1 Na+/H+ antiporter subunit E -
  QLQ02_RS12065 - 2392201..2393682 (-) 1482 WP_286058044.1 Na+/H+ antiporter subunit D -
  QLQ02_RS12070 - 2393675..2394016 (-) 342 WP_010331684.1 Na(+)/H(+) antiporter subunit C -
  QLQ02_RS12075 - 2394016..2394447 (-) 432 WP_286058045.1 Na(+)/H(+) antiporter subunit B -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24142.49 Da        Isoelectric Point: 4.6801

>NTDB_id=844452 QLQ02_RS12040 WP_010331690.1 2389996..2390640(+) (comA) [Bacillus mojavensis strain KRS009]
MKKILVIDDHPAVMEGTKTILETDSNLSVDCLSPEPSEQFIRQHDFSSYDLILMDLNLGGDVNGMELSKQILQENPHCKI
IVYTGYEVEDYFEEAIRAGLHGAISKTESKEKITQYIYHVLNGEILVDFAYFKQLMTQQKTKPAPSSQKEQDVLTPRECL
ILQEVEKGFTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDGVL

Nucleotide


Download         Length: 645 bp        

>NTDB_id=844452 QLQ02_RS12040 WP_010331690.1 2389996..2390640(+) (comA) [Bacillus mojavensis strain KRS009]
ATGAAAAAGATACTAGTGATTGATGACCATCCGGCTGTCATGGAAGGCACCAAGACAATTTTGGAAACGGATTCGAATTT
GTCTGTTGATTGTCTCAGTCCTGAACCCAGCGAACAGTTCATACGCCAGCATGATTTCTCATCATATGATCTCATTTTAA
TGGATTTGAACTTAGGCGGCGATGTCAATGGGATGGAGCTTTCTAAACAGATTTTACAAGAGAATCCTCATTGTAAAATT
ATCGTATATACCGGTTATGAGGTCGAGGATTATTTTGAGGAAGCGATTCGTGCGGGTCTGCACGGCGCCATCAGCAAAAC
CGAATCAAAGGAAAAGATCACCCAATACATATATCACGTGCTCAACGGAGAAATTTTAGTCGATTTCGCTTACTTTAAAC
AGCTGATGACTCAGCAAAAAACAAAGCCGGCCCCTTCCTCTCAAAAAGAACAAGATGTGCTCACACCAAGAGAATGCCTG
ATTCTTCAAGAAGTTGAAAAAGGTTTTACCAACCAAGAAATTGCAGATGCGCTTCATTTAAGCAAGCGGTCCATTGAATA
CAGCCTGACGTCGATTTTCAACAAGCTTAATGTCGGTTCCCGGACGGAAGCGGTGTTGATTGCAAAATCAGACGGTGTGC
TTTAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, luxR family (GerE)

(152-208)

Response regulator receiver domain (Response_reg)

(4-117)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

99.065

100

0.991