Detailed information NTG0084110

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: JG741_RS11790
• Genome accession: NZ_AP024210
• Coordinates: 2305402..2306385 (+)
• Length: 327 a.a.
• NCBI ID: WP_032950503.1
• Uniprot ID: A0A1V0PIB8
• Organism: Lactococcus cremoris strain G3-2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2300402..2311385

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JG741_RS11770 (LLG32_24270)	-	2300469..2301305 (-)	837	WP_011676728.1	Cof-type HAD-IIB family hydrolase	-
JG741_RS11775 (LLG32_24280)	-	2301611..2303032 (+)	1422	WP_126354756.1	NCS2 family permease	-
JG741_RS14590 (LLG32_24290)	-	2303225..2303461 (+)	237	WP_250638220.1	alpha/beta hydrolase	-
JG741_RS11780 (LLG32_24300)	-	2303500..2304087 (+)	588	WP_250638196.1	alpha/beta hydrolase	-
JG741_RS11785 (LLG32_24310)	-	2304242..2305327 (+)	1086	WP_061777780.1	YdcF family protein	-
JG741_RS11790 (LLG32_24320)	coiA	2305402..2306385 (+)	984	WP_032950503.1	competence protein CoiA	Machinery gene
JG741_RS11795 (LLG32_24330)	pepF	2306460..2308265 (+)	1806	WP_021165608.1	oligoendopeptidase F	Regulator
JG741_RS11800 (LLG32_24340)	-	2308268..2308951 (+)	684	WP_011676723.1	O-methyltransferase	-
JG741_RS11805 (LLG32_24350)	-	2309107..2310030 (+)	924	WP_061777779.1	peptidyl-prolyl cis-trans isomerase	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 39121.86 Da
• Isoelectric Point: 9.7664

>NTDB_id=84110 JG741_RS11790 WP_032950503.1 2305402..2306385(+) (coiA) [Lactococcus cremoris strain G3-2]
MLTAIDENNKIINLLELERKELTGKFYCPSCHAELLIKNGQIKVLHFAHKSLKSCNLWLENESEQHLGLKKILYQWFKRT
DKVEIERYLPELNQRPDLLVNDKIAIEIQCSHLSIKRLKERTENYKAHGFKVLWLMGKDLWLAEQVTKLQKNLVYFSENR
GFFYWELDFQRKKLRLKSLIHEDLRGRIICLQEEIPFGKGRLIAHLRLPYLAQKLVKIPTFKDPKLSSFIRQQLYYQSPK
WMKIQEKYYQKGENLLTKKFEGPYIAPLGLNLLESFTDEMTITTFTQIDQNVKLYYENFLINFQRNSLEMLYPPCFYAIM
GKQKKEK

Nucleotide

• Length: 984 bp

>NTDB_id=84110 JG741_RS11790 WP_032950503.1 2305402..2306385(+) (coiA) [Lactococcus cremoris strain G3-2]
ATGCTGACAGCAATTGATGAAAATAATAAAATAATAAACTTACTGGAATTAGAACGCAAAGAATTGACCGGGAAATTTTA
TTGTCCTTCTTGTCATGCAGAGCTACTTATTAAAAATGGGCAGATAAAAGTTCTTCATTTTGCCCATAAATCTCTAAAGA
GCTGCAATTTATGGTTGGAAAATGAGTCAGAACAGCATTTAGGTTTGAAAAAAATATTATATCAGTGGTTTAAAAGGACT
GACAAAGTCGAAATTGAACGCTATTTGCCCGAACTTAACCAAAGACCAGATTTATTAGTAAATGACAAAATCGCTATTGA
GATACAATGCTCTCATTTATCTATTAAGCGCCTCAAAGAACGTACAGAAAATTATAAGGCGCATGGCTTTAAAGTGCTTT
GGTTGATGGGAAAGGATTTATGGCTGGCTGAACAGGTGACAAAACTTCAAAAAAATTTAGTTTATTTCTCGGAAAATAGA
GGATTCTTTTATTGGGAGTTAGATTTTCAGAGGAAAAAATTAAGATTAAAATCTCTTATTCATGAGGATTTACGCGGCAG
AATCATTTGCTTACAAGAGGAAATTCCTTTTGGAAAAGGACGACTTATTGCGCATCTACGCTTACCTTATTTGGCGCAAA
AACTGGTGAAAATTCCTACTTTTAAAGATCCTAAACTTTCTAGTTTTATTCGTCAGCAATTATACTATCAATCACCAAAA
TGGATGAAAATTCAAGAAAAATATTATCAAAAAGGAGAAAATTTACTGACGAAAAAATTTGAAGGTCCATACATTGCTCC
ACTAGGTTTAAATTTACTAGAGAGTTTTACTGACGAAATGACGATCACAACTTTTACTCAGATTGATCAAAATGTTAAGC
TTTACTATGAAAATTTTTTAATAAATTTCCAAAGAAATAGCCTTGAAATGCTCTATCCTCCCTGTTTCTATGCTATAATG
GGAAAGCAGAAGAAGGAAAAATAA

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (1-254)

3D structure

• AlphaFold DB: A0A1V0PIB8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Lactococcus lactis subsp. cremoris KW2	97.248	100	0.972
coiA	Streptococcus mitis NCTC 12261	44.444	99.083	0.44
coiA	Streptococcus pneumoniae TIGR4	43.21	99.083	0.428
coiA	Streptococcus pneumoniae Rx1	43.21	99.083	0.428
coiA	Streptococcus pneumoniae D39	43.21	99.083	0.428
coiA	Streptococcus pneumoniae R6	43.21	99.083	0.428