Detailed information NTG0840799

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: VKP36_RS05560
• Genome accession: NZ_CP142357
• Coordinates: 1109114..1110076 (-)
• Length: 320 a.a.
• NCBI ID: WP_002995771.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain AW-534
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1104114..1115076

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VKP36_RS05545 (VKP36_05545)	-	1104952..1105659 (-)	708	WP_063631966.1	O-methyltransferase	-
VKP36_RS05550 (VKP36_05550)	-	1105725..1106921 (-)	1197	WP_063631969.1	OFA family MFS transporter	-
VKP36_RS05555 (VKP36_05555)	pepF	1107296..1109101 (-)	1806	WP_326624358.1	oligoendopeptidase F	Regulator
VKP36_RS05560 (VKP36_05560)	coiA	1109114..1110076 (-)	963	WP_002995771.1	competence protein CoiA	Machinery gene
VKP36_RS05565 (VKP36_05565)	-	1110371..1111087 (-)	717	WP_032462853.1	pseudouridine synthase	-
VKP36_RS05570 (VKP36_05570)	nagB	1111161..1111910 (-)	750	WP_038434150.1	glucosamine-6-phosphate deaminase	-
VKP36_RS05575 (VKP36_05575)	queA	1112112..1113140 (+)	1029	WP_326624361.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
VKP36_RS05580 (VKP36_05580)	-	1113147..1114367 (+)	1221	WP_326624363.1	DUF3114 domain-containing protein	-
VKP36_RS05585 (VKP36_05585)	-	1114481..1114870 (-)	390	WP_281727213.1	hypothetical protein	-
VKP36_RS05590 (VKP36_05590)	-	1114833..1115060 (-)	228	WP_281727214.1	hypothetical protein	-

Sequence

Protein

• Length: 320 a.a.
• Molecular weight: 37748.20 Da
• Isoelectric Point: 10.2013

>NTDB_id=840799 VKP36_RS05560 WP_002995771.1 1109114..1110076(-) (coiA) [Streptococcus pyogenes strain AW-534]
MTKILTALDGKNQLISLVTQPISTKPPFCCPACKSPVRLRQGTIRRPHFAHVQLAHCQFQAENESEEHLTLKAKLYTSLV
RTEAVCIEKYLPELQQIADLWVNDKLALEIQCSPLPVERLKKRTKAYQEKGYPVRWLLGRKLWLNTHLTALQKQFLYFSS
SLGFHLWELDAAANLLRLKYLIHEDLFGKVSYLTKTISLDHNIMEMFRLPYQQEILYSYQKKMTVNLSKRIQRALLARHP
KWLRRQEKAYLSGYNLLMLTTDAFYPQWRPVQSSSGFCQIKGNLRPYYESFKVYYKKEKDKKVQTLFSPKYYVKMDSNRK

Nucleotide

• Length: 963 bp

>NTDB_id=840799 VKP36_RS05560 WP_002995771.1 1109114..1110076(-) (coiA) [Streptococcus pyogenes strain AW-534]
GTGACAAAAATATTAACCGCTTTAGATGGTAAGAATCAGCTCATTTCGCTAGTAACTCAGCCTATTTCAACGAAACCGCC
TTTTTGTTGCCCAGCTTGCAAATCTCCTGTTCGCTTGCGTCAGGGGACAATTAGACGACCTCATTTTGCCCATGTACAAC
TAGCTCATTGTCAATTCCAAGCAGAAAATGAATCTGAGGAACATTTGACGTTGAAGGCAAAACTTTACACCAGTTTAGTC
CGAACAGAAGCTGTCTGTATTGAAAAATATCTTCCTGAGCTGCAACAGATAGCAGACCTTTGGGTGAATGATAAGTTAGC
CTTAGAAATTCAGTGCAGTCCCTTGCCAGTTGAGCGTCTAAAGAAACGCACCAAAGCCTATCAAGAAAAGGGGTATCCGG
TACGATGGTTACTGGGAAGAAAATTGTGGCTTAACACTCACTTAACTGCTTTGCAAAAACAGTTTCTTTACTTTTCATCT
AGTTTGGGCTTTCATTTGTGGGAGCTGGATGCAGCTGCAAATCTGCTACGTCTCAAATATTTAATCCATGAAGACTTATT
TGGTAAGGTAAGTTACCTAACTAAAACCATTTCTTTAGACCACAATATTATGGAAATGTTTCGATTACCCTATCAGCAAG
AAATCCTTTATTCTTATCAGAAAAAAATGACTGTGAACCTATCTAAAAGAATACAAAGAGCTCTTTTAGCTAGACACCCG
AAATGGCTACGACGACAAGAAAAGGCTTACTTATCAGGCTATAATTTACTTATGTTAACAACTGATGCTTTTTATCCTCA
ATGGAGACCAGTTCAATCTTCCAGCGGTTTTTGTCAAATTAAAGGAAATCTTCGCCCTTATTATGAAAGTTTTAAAGTCT
ATTATAAAAAAGAAAAGGATAAGAAGGTGCAAACGCTTTTTTCACCAAAATATTATGTTAAAATGGATAGTAATAGAAAA
TGA

Domains

Predicted by InterProScan.

• Competence protein CoiA-like family (CoiA_nuc) (19-265)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus mitis NCTC 12261	42.903	96.875	0.416
coiA	Streptococcus pneumoniae Rx1	41.613	96.875	0.403
coiA	Streptococcus pneumoniae D39	41.613	96.875	0.403
coiA	Streptococcus pneumoniae R6	41.613	96.875	0.403
coiA	Streptococcus pneumoniae TIGR4	41.613	96.875	0.403
coiA	Lactococcus lactis subsp. cremoris KW2	39.329	100	0.403