Detailed information NTG0840422

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: VKP39_RS05510
• Genome accession: NZ_CP142353
• Coordinates: 1091723..1092685 (-)
• Length: 320 a.a.
• NCBI ID: WP_002995771.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain D641
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1086723..1097685

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VKP39_RS05495 (VKP39_05495)	-	1087560..1088267 (-)	708	WP_002984000.1	O-methyltransferase	-
VKP39_RS05500 (VKP39_05500)	-	1088333..1089529 (-)	1197	WP_063629791.1	OFA family MFS transporter	-
VKP39_RS05505 (VKP39_05505)	pepF	1089905..1091710 (-)	1806	WP_020837346.1	oligoendopeptidase F	Regulator
VKP39_RS05510 (VKP39_05510)	coiA	1091723..1092685 (-)	963	WP_002995771.1	competence protein CoiA	Machinery gene
VKP39_RS05515 (VKP39_05515)	-	1092980..1093696 (-)	717	WP_109828817.1	pseudouridine synthase	-
VKP39_RS05520 (VKP39_05520)	nagB	1093815..1094519 (-)	705	WP_009880651.1	glucosamine-6-phosphate deaminase	-
VKP39_RS05525 (VKP39_05525)	queA	1094721..1095749 (+)	1029	WP_030126962.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
VKP39_RS05530 (VKP39_05530)	-	1095756..1096976 (+)	1221	WP_002983986.1	DUF3114 domain-containing protein	-
VKP39_RS05535 (VKP39_05535)	-	1097090..1097362 (-)	273	WP_281727591.1	hypothetical protein	-
VKP39_RS05540 (VKP39_05540)	-	1097387..1097680 (-)	294	WP_306460904.1	hypothetical protein	-

Sequence

Protein

• Length: 320 a.a.
• Molecular weight: 37748.20 Da
• Isoelectric Point: 10.2013

>NTDB_id=840422 VKP39_RS05510 WP_002995771.1 1091723..1092685(-) (coiA) [Streptococcus pyogenes strain D641]
MTKILTALDGKNQLISLVTQPISTKPPFCCPACKSPVRLRQGTIRRPHFAHVQLAHCQFQAENESEEHLTLKAKLYTSLV
RTEAVCIEKYLPELQQIADLWVNDKLALEIQCSPLPVERLKKRTKAYQEKGYPVRWLLGRKLWLNTHLTALQKQFLYFSS
SLGFHLWELDAAANLLRLKYLIHEDLFGKVSYLTKTISLDHNIMEMFRLPYQQEILYSYQKKMTVNLSKRIQRALLARHP
KWLRRQEKAYLSGYNLLMLTTDAFYPQWRPVQSSSGFCQIKGNLRPYYESFKVYYKKEKDKKVQTLFSPKYYVKMDSNRK

Nucleotide

• Length: 963 bp

>NTDB_id=840422 VKP39_RS05510 WP_002995771.1 1091723..1092685(-) (coiA) [Streptococcus pyogenes strain D641]
GTGACAAAAATATTAACCGCTTTAGATGGTAAGAATCAGCTCATTTCGCTAGTAACTCAGCCTATTTCAACGAAACCGCC
TTTTTGTTGCCCAGCTTGCAAATCTCCTGTTCGCTTGCGTCAGGGGACAATTAGACGACCTCATTTTGCCCATGTACAAC
TAGCTCATTGTCAATTCCAAGCAGAAAATGAATCTGAGGAACATTTGACGTTGAAGGCAAAACTTTACACCAGTTTAGTC
CGAACAGAAGCTGTCTGTATTGAAAAATATCTTCCTGAGCTGCAACAGATAGCAGACCTTTGGGTGAATGATAAGTTAGC
CTTAGAAATTCAGTGCAGTCCCTTGCCAGTGGAGCGTCTAAAGAAACGCACCAAAGCCTATCAAGAAAAGGGGTATCCGG
TACGATGGTTACTGGGAAGAAAATTGTGGCTTAACACTCACTTAACTGCTTTGCAAAAACAGTTTCTTTACTTTTCATCT
AGTTTGGGCTTTCATTTGTGGGAGCTGGATGCAGCTGCAAATCTGCTACGTCTCAAATATTTAATCCATGAAGACTTATT
TGGTAAGGTAAGTTACCTAACCAAAACCATTTCTTTAGACCATAATATTATGGAAATGTTTCGGTTACCCTATCAGCAAG
AAATCCTTTATTCTTATCAGAAAAAAATGACTGTGAACCTATCTAAAAGAATACAAAGAGCTCTTTTAGCTAGACACCCG
AAATGGCTACGACGACAAGAAAAGGCTTACTTATCAGGCTATAATTTACTTATGTTAACAACTGATGCTTTTTATCCTCA
ATGGAGACCAGTTCAATCTTCCAGCGGTTTTTGTCAAATTAAAGGAAATCTTCGCCCTTATTATGAAAGTTTTAAAGTCT
ATTATAAAAAAGAAAAGGATAAGAAGGTGCAAACGCTTTTTTCACCAAAATATTATGTTAAAATGGATAGTAATAGAAAA
TGA

Domains

Predicted by InterProScan.

• Competence protein CoiA-like family (CoiA_nuc) (19-265)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus mitis NCTC 12261	42.903	96.875	0.416
coiA	Streptococcus pneumoniae Rx1	41.613	96.875	0.403
coiA	Streptococcus pneumoniae D39	41.613	96.875	0.403
coiA	Streptococcus pneumoniae R6	41.613	96.875	0.403
coiA	Streptococcus pneumoniae TIGR4	41.613	96.875	0.403
coiA	Lactococcus lactis subsp. cremoris KW2	39.329	100	0.403