Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | QPL68_RS07650 | Genome accession | NZ_CP126629 |
| Coordinates | 1546733..1547236 (-) | Length | 167 a.a. |
| NCBI ID | WP_000934799.1 | Uniprot ID | A0A7U7IE99 |
| Organism | Staphylococcus aureus strain 35-42 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1524997..1549386 | 1546733..1547236 | within | 0 |
Gene organization within MGE regions
Location: 1524997..1549386
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QPL68_RS07485 (QPL68_07485) | - | 1524997..1525251 (-) | 255 | WP_000466746.1 | GlsB/YeaQ/YmgE family stress response membrane protein | - |
| QPL68_RS07490 (QPL68_07490) | - | 1525544..1525807 (+) | 264 | WP_001055897.1 | helix-turn-helix transcriptional regulator | - |
| QPL68_RS07495 (QPL68_07495) | - | 1525944..1526516 (-) | 573 | WP_115289157.1 | PepSY domain-containing protein | - |
| QPL68_RS07500 (QPL68_07500) | - | 1526696..1527064 (-) | 369 | WP_063650640.1 | YxeA family protein | - |
| QPL68_RS07505 (QPL68_07505) | selX | 1527433..1528044 (-) | 612 | WP_063650641.1 | staphylococcal enterotoxin-like toxin X | - |
| QPL68_RS07510 (QPL68_07510) | - | 1528250..1528951 (+) | 702 | Protein_1440 | tyrosine-type recombinase/integrase | - |
| QPL68_RS07515 (QPL68_07515) | - | 1529002..1529940 (+) | 939 | WP_078055966.1 | Abi family protein | - |
| QPL68_RS07520 (QPL68_07520) | - | 1530737..1530916 (-) | 180 | WP_000797954.1 | hypothetical protein | - |
| QPL68_RS07525 (QPL68_07525) | - | 1530932..1531444 (-) | 513 | WP_000813311.1 | hypothetical protein | - |
| QPL68_RS07530 (QPL68_07530) | - | 1531563..1531871 (-) | 309 | WP_254613563.1 | pathogenicity island protein | - |
| QPL68_RS07535 (QPL68_07535) | - | 1532188..1532655 (-) | 468 | WP_141060452.1 | hypothetical protein | - |
| QPL68_RS07540 (QPL68_07540) | - | 1532668..1533681 (-) | 1014 | WP_029625650.1 | DUF6731 family protein | - |
| QPL68_RS13520 | - | 1533932..1534021 (-) | 90 | Protein_1447 | terminase small subunit | - |
| QPL68_RS07550 (QPL68_07550) | - | 1534068..1534637 (-) | 570 | WP_001293084.1 | terminase small subunit | - |
| QPL68_RS07555 (QPL68_07555) | - | 1534634..1534975 (-) | 342 | WP_000358778.1 | hypothetical protein | - |
| QPL68_RS07560 (QPL68_07560) | - | 1534978..1535505 (-) | 528 | WP_063650266.1 | spore coat protein | - |
| QPL68_RS07565 (QPL68_07565) | - | 1535556..1535774 (-) | 219 | WP_000853272.1 | capsid morphogenesis B protein | - |
| QPL68_RS07570 (QPL68_07570) | - | 1535792..1536370 (-) | 579 | WP_259378435.1 | pathogenicity island protein | - |
| QPL68_RS07575 (QPL68_07575) | - | 1536382..1536723 (-) | 342 | WP_259378436.1 | pathogenicity island protein | - |
| QPL68_RS07580 (QPL68_07580) | - | 1537259..1537900 (-) | 642 | WP_115056390.1 | pathogenicity island protein | - |
| QPL68_RS07585 (QPL68_07585) | - | 1537897..1538277 (-) | 381 | WP_141060241.1 | hypothetical protein | - |
| QPL68_RS07590 (QPL68_07590) | - | 1538589..1540298 (-) | 1710 | WP_141060242.1 | DUF927 domain-containing protein | - |
| QPL68_RS07595 (QPL68_07595) | - | 1540312..1541181 (-) | 870 | WP_285145962.1 | primase alpha helix C-terminal domain-containing protein | - |
| QPL68_RS07600 (QPL68_07600) | - | 1541247..1541564 (-) | 318 | WP_141060244.1 | DUF1474 family protein | - |
| QPL68_RS07605 (QPL68_07605) | - | 1541565..1541948 (-) | 384 | WP_141060245.1 | pathogenicity island protein | - |
| QPL68_RS07610 (QPL68_07610) | - | 1541950..1542153 (-) | 204 | WP_001231376.1 | hypothetical protein | - |
| QPL68_RS07615 (QPL68_07615) | - | 1542120..1542293 (-) | 174 | WP_000784892.1 | hypothetical protein | - |
| QPL68_RS07620 (QPL68_07620) | - | 1542305..1542576 (-) | 272 | Protein_1462 | helix-turn-helix domain-containing protein | - |
| QPL68_RS07625 (QPL68_07625) | - | 1542577..1542789 (-) | 213 | WP_285145964.1 | helix-turn-helix transcriptional regulator | - |
| QPL68_RS07630 (QPL68_07630) | - | 1542934..1543629 (+) | 696 | WP_000668212.1 | helix-turn-helix domain-containing protein | - |
| QPL68_RS07635 (QPL68_07635) | - | 1544085..1545299 (+) | 1215 | Protein_1465 | site-specific integrase | - |
| QPL68_RS07640 (QPL68_07640) | - | 1545301..1546200 (+) | 900 | WP_141061945.1 | Abi family protein | - |
| QPL68_RS07645 (QPL68_07645) | rpsR | 1546439..1546681 (-) | 243 | WP_000897044.1 | 30S ribosomal protein S18 | - |
| QPL68_RS07650 (QPL68_07650) | ssbA | 1546733..1547236 (-) | 504 | WP_000934799.1 | single-stranded DNA-binding protein | Machinery gene |
| QPL68_RS07655 (QPL68_07655) | rpsF | 1547257..1547553 (-) | 297 | WP_001261460.1 | 30S ribosomal protein S6 | - |
| QPL68_RS07660 (QPL68_07660) | - | 1547797..1547988 (+) | 192 | WP_001052483.1 | hypothetical protein | - |
| QPL68_RS07665 (QPL68_07665) | ychF | 1548074..1549171 (-) | 1098 | WP_176429780.1 | redox-regulated ATPase YchF | - |
| QPL68_RS07670 (QPL68_07670) | - | 1549183..1549386 (-) | 204 | WP_000157348.1 | DUF951 domain-containing protein | - |
Sequence
Protein
Download Length: 167 a.a. Molecular weight: 18539.12 Da Isoelectric Point: 4.7305
>NTDB_id=839296 QPL68_RS07650 WP_000934799.1 1546733..1547236(-) (ssbA) [Staphylococcus aureus strain 35-42]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
Nucleotide
Download Length: 504 bp
>NTDB_id=839296 QPL68_RS07650 WP_000934799.1 1546733..1547236(-) (ssbA) [Staphylococcus aureus strain 35-42]
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGTGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGTGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
65.341 |
100 |
0.689 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
54.971 |
100 |
0.563 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
63.473 |
0.371 |
| ssb | Glaesserella parasuis strain SC1401 |
34.463 |
100 |
0.365 |