Detailed information NTG0838825

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: QPK28_RS19635
• Genome accession: NZ_CP126576
• Coordinates: 3706765..3707922 (-)
• Length: 385 a.a.
• NCBI ID: WP_003185733.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain CQMB003
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3701765..3712922

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QPK28_RS19605	-	3702007..3702426 (-)	420	WP_003185715.1	TIGR03826 family flagellar region protein	-
QPK28_RS19610	comFC	3702485..3703219 (-)	735	WP_059260889.1	amidophosphoribosyltransferase	Machinery gene
QPK28_RS19615	-	3703176..3703460 (-)	285	WP_003185718.1	competence protein ComFB	-
QPK28_RS19620	comFA	3703515..3704909 (-)	1395	WP_059260886.1	DEAD/DEAH box helicase	Machinery gene
QPK28_RS19625	-	3705032..3705874 (-)	843	WP_003185726.1	DegV family protein	-
QPK28_RS19630	degU	3705994..3706683 (-)	690	WP_003185730.1	two-component system response regulator DegU	Regulator
QPK28_RS19635	degS	3706765..3707922 (-)	1158	WP_003185733.1	histidine kinase	Regulator
QPK28_RS19640	-	3708136..3708774 (+)	639	WP_003185736.1	YigZ family protein	-
QPK28_RS19645	-	3708789..3709865 (+)	1077	WP_003185737.1	LCP family protein	-
QPK28_RS19650	-	3709950..3710324 (-)	375	WP_003185738.1	hypothetical protein	-
QPK28_RS19655	-	3710444..3711508 (-)	1065	WP_003185739.1	MraY family glycosyltransferase	-
QPK28_RS19660	-	3711639..3712820 (-)	1182	WP_059260879.1	glycosyltransferase family 1 protein	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44636.36 Da
• Isoelectric Point: 6.7863

>NTDB_id=838825 QPK28_RS19635 WP_003185733.1 3706765..3707922(-) (degS) [Bacillus licheniformis strain CQMB003]
MSVSKMDSKVLDSIIMKMLKTVDGSKDEVFQIGEQSRQQYEGLVEELKQIKQQVNEVIDLGDRLEVHARHARNRLSEVSR
NFHKFSEEEIREAYEKAHKLQVELTMIQQREKQLREKRDDLERRLLGLQEIIERSEGLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDKGTEEGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEDYHGKAKIHFQCIGESEERRIAPRFEVALFRLAQEAVTNALKHSESTEIHVKVEV
TKDFVTLIIKDNGNGFDLKEVKGKKNKSFGLLGMKERVDLLEGSMTIDSKIGLGTFILIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=838825 QPK28_RS19635 WP_003185733.1 3706765..3707922(-) (degS) [Bacillus licheniformis strain CQMB003]
GTGAGCGTTTCCAAAATGGACTCCAAAGTTTTAGATTCAATCATTATGAAGATGTTAAAAACGGTTGACGGGAGCAAGGA
TGAAGTCTTTCAAATCGGAGAGCAGTCCCGCCAGCAATACGAAGGCTTGGTAGAAGAGCTGAAACAGATTAAACAGCAGG
TCAACGAAGTCATCGATCTTGGAGACAGGCTGGAAGTGCATGCCCGCCATGCGCGGAACCGCTTGTCAGAGGTCAGCAGA
AACTTTCATAAATTCAGTGAAGAAGAGATTCGCGAAGCTTATGAAAAAGCCCACAAACTGCAGGTTGAACTGACAATGAT
CCAGCAGCGGGAAAAGCAGCTGAGAGAGAAGCGTGATGATCTGGAACGGCGCCTTTTGGGGCTTCAGGAAATCATCGAGC
GTTCAGAAGGGCTTGTCAGTCAGATTACCGTCGTCTTAAACTACTTAAATCAGGATCTGCGCCAGGTCGGCGTTCTCCTT
GAAGATGCGCAGGCCAAGCAGGATTTCGGACTGCGGATTATCGAAGCCCAGGAGGAAGAAAGAAAAAGGGTCTCAAGGGA
AATCCACGACGGTCCTGCGCAAATGCTGGCCAACGTTATGATGAGATCTGAACTGATCGAACGCATCTTCAGAGACAAAG
GAACAGAAGAAGGCTTTCAGGAAATTAAAAACCTCCGGCAAAACGTCAGAAATGCTCTTTATGAAGTCAGAAGAATCATT
TATGATTTAAGGCCGATGGCTTTAGACGATTTGGGATTGATACCGACGCTCAGAAAATACTTGAACACGATCGAAGATTA
TCATGGAAAAGCAAAGATTCATTTCCAATGCATCGGAGAATCCGAAGAAAGAAGAATAGCACCGCGGTTTGAGGTTGCAC
TATTCCGGCTTGCACAGGAAGCGGTGACAAACGCCTTAAAACACTCCGAATCAACTGAAATTCATGTTAAAGTAGAAGTG
ACAAAAGATTTTGTGACGCTGATTATCAAAGACAATGGAAACGGCTTTGACTTAAAAGAAGTAAAAGGCAAGAAGAACAA
ATCTTTCGGTCTGCTAGGTATGAAAGAAAGAGTCGATTTGCTCGAAGGCTCAATGACAATCGATTCGAAAATAGGTCTTG
GGACATTTATATTGATTAAAGTTCCACTGTCTTTGTAA

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (292-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	89.351	100	0.894