Detailed information NTG0838341

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: QPL77_RS16950
• Genome accession: NZ_CP126521
• Coordinates: 3284926..3286101 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus pumilus strain Monterrey_S2
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3279926..3291101

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QPL77_RS16920 (QPL77_16920)	-	3280094..3280513 (-)	420	WP_144523414.1	TIGR03826 family flagellar region protein	-
QPL77_RS16925 (QPL77_16925)	comFC	3280570..3281256 (-)	687	WP_211063637.1	ComF family protein	Machinery gene
QPL77_RS16930 (QPL77_16930)	-	3281253..3281546 (-)	294	WP_144523415.1	late competence development ComFB family protein	-
QPL77_RS16935 (QPL77_16935)	comFA	3281613..3282992 (-)	1380	WP_211063638.1	DEAD/DEAH box helicase	Machinery gene
QPL77_RS16940 (QPL77_16940)	-	3283112..3283954 (-)	843	WP_144523417.1	DegV family protein	-
QPL77_RS16945 (QPL77_16945)	degU	3284172..3284861 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
QPL77_RS16950 (QPL77_16950)	degS	3284926..3286101 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
QPL77_RS16955 (QPL77_16955)	-	3286323..3286991 (+)	669	WP_012011434.1	YigZ family protein	-
QPL77_RS16960 (QPL77_16960)	-	3286976..3288067 (+)	1092	WP_211063639.1	LCP family protein	-
QPL77_RS16965 (QPL77_16965)	-	3288103..3289170 (-)	1068	WP_144523660.1	MraY family glycosyltransferase	-
QPL77_RS16970 (QPL77_16970)	-	3289302..3290498 (-)	1197	WP_284553849.1	glycosyltransferase	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=838341 QPL77_RS16950 WP_003213166.1 3284926..3286101(-) (degS) [Bacillus pumilus strain Monterrey_S2]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=838341 QPL77_RS16950 WP_003213166.1 3284926..3286101(-) (degS) [Bacillus pumilus strain Monterrey_S2]
ATGACAACACCTAAAATGGATCCGAAATTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGCAAGGA
CGAAGTATTTAGGATAGGCGAACAGTCCCGTCAACAATATGAAAGCCTTGTAGAAGAGCTGAAGCAAATCAAGCAGCAAG
TAAACGAAGTAATTGATTTTGGGGATAAACTAGAAGTCCATACGAGACATGCTAGAAATCGCTTATCTGAGGTCAGCCGA
AACTTCAACAAATTTAGCGAAGAAGAAATACGCGAGGCCTACGAAAAAGCGCATAATCTTCAGGTGGAACTCACCATGAT
CCAGCAGCGCGAAAAGCAGCTGAGAGAAAGAAGAGATGATCTAGAAAGACGATTGTTAAGCCTACAAGACGTCATTGAAC
GCTCTGAAACGCTTGTGAGTCAGATCACAGTTGTTCTCAACTACCTCAATCAGGACTTACGCCAAGTTGGCGTGTTACTC
GAAGATGCTCAGGCAAAACAAGATTTTGGACTTAGAATTATTGAAGCCCAAGAAGAAGAACGCAAAAGGGTATCCCGTGA
AATTCATGACGGTCCGGCTCAGATGCTGGCAAACGTGATGATGCGATCCGAATTAATTGAACGGATTTTTAGAGACCGTG
GGACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTCAGACAGAATGTGCGAAATGCTCTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCAATGGCTTTAGATGATTTGGGTCTCATTCCGACGCTAAGAAAATATTTAAACACAATCGAAGAGTA
TGATGGGAAAACCAAGATCACATTCCAATGCCTAGGAGATACAGAAAGTGAAAGAATTGCTTCTCAATTTGAAGTGGCAC
TGTTTAGACTAGCCCAAGAAGCTGTCACAAATTCACTAAAGCATTCCGAAGCTGAAGAAATCTCTGTGAAAGTAGAAGTG
ACGAAAGACTTTGTCACGTTAATTATCAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTGAAAACAAACAAAAACAA
ATCCTTCGGTTTACTTGGCATGAAAGAACGCGTAGACTTACTGGAAGGCAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATACGCGTGCCATTAACATTGCAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841