Detailed information NTG0837545

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: QN289_RS07890
• Genome accession: NZ_CP126312
• Coordinates: 1499387..1500277 (-)
• Length: 296 a.a.
• NCBI ID: WP_284182765.1
• Uniprot ID: -
• Organism: Latilactobacillus curvatus strain KFRI-K200347
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1494387..1505277

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QN289_RS07870 (QN289_07870)	secA	1495007..1497370 (-)	2364	WP_004270228.1	preprotein translocase subunit SecA	-
QN289_RS07875 (QN289_07875)	raiA	1497599..1498144 (-)	546	WP_004270226.1	ribosome-associated translation inhibitor RaiA	-
QN289_RS07880 (QN289_07880)	comFC	1498270..1498800 (-)	531	WP_155275694.1	ComF family protein	Machinery gene
QN289_RS07885 (QN289_07885)	comFA	1498944..1499387 (-)	444	WP_284182764.1	helicase-related protein	Machinery gene
QN289_RS07890 (QN289_07890)	comFA	1499387..1500277 (-)	891	WP_284182765.1	DEAD/DEAH box helicase	Machinery gene
QN289_RS07895 (QN289_07895)	-	1500334..1500996 (+)	663	WP_039099348.1	YigZ family protein	-
QN289_RS07900 (QN289_07900)	-	1501021..1502109 (-)	1089	WP_004270225.1	MraY family glycosyltransferase	-
QN289_RS07905 (QN289_07905)	hemH	1502219..1502932 (-)	714	WP_311732756.1	ferrochelatase	-
QN289_RS07910 (QN289_07910)	rny	1503166..1504728 (-)	1563	WP_004270250.1	ribonuclease Y	-

Sequence

Protein

• Length: 296 a.a.
• Molecular weight: 32967.45 Da
• Isoelectric Point: 8.3017

>NTDB_id=837545 QN289_RS07890 WP_284182765.1 1499387..1500277(-) (comFA) [Latilactobacillus curvatus strain KFRI-K200347]
MMAKQLAYGRQWSATQLSTVMNNYSLPQIKQRLAFQIVNQRLVCQRCGQVVKEQARLPDGRYYCAACLTFGRLVEGDQLV
YVPECNLFESIVEPLTWSGTLTPFQAQAAKQIVVVITKQQRHVLTAVTGAGKTEMLFQGIATALANGQRVCVAAPRVAVC
LELYPRLQAAFANTPIMLMHGEQTAPYRYTPLVVCTTHQLFKFYQAFDTVIVDEVDAFPFVNNPQLEMAVKQACKPCCAL
IYLTATPTVKLRHAINTGDLTGSELPIRFHGHLLPEPHCYPLFTCGVQLNGISYHP

Nucleotide

• Length: 891 bp

>NTDB_id=837545 QN289_RS07890 WP_284182765.1 1499387..1500277(-) (comFA) [Latilactobacillus curvatus strain KFRI-K200347]
ATGATGGCAAAACAACTTGCTTATGGTCGTCAGTGGAGTGCCACCCAATTGAGTACCGTTATGAATAATTATAGTTTACC
ACAGATTAAACAGCGACTAGCGTTTCAAATAGTTAATCAGCGTCTGGTATGTCAACGGTGTGGACAAGTGGTGAAAGAGC
AAGCTCGCTTACCTGATGGTCGGTATTATTGTGCTGCTTGCTTGACCTTTGGGCGGTTAGTGGAAGGGGATCAGTTGGTT
TACGTGCCTGAATGCAATCTGTTTGAGTCGATCGTAGAACCGCTAACTTGGTCGGGGACACTAACCCCTTTTCAAGCACA
AGCCGCAAAGCAGATTGTTGTGGTCATTACCAAGCAACAACGCCATGTCTTAACTGCAGTGACCGGTGCTGGTAAAACTG
AGATGTTATTTCAAGGCATTGCGACGGCTTTAGCTAATGGGCAGCGTGTGTGTGTTGCTGCGCCGCGGGTGGCGGTTTGT
TTAGAACTCTATCCGCGCTTGCAAGCAGCGTTTGCTAACACACCAATCATGCTGATGCATGGGGAACAGACTGCGCCTTA
CCGGTATACGCCGTTAGTTGTTTGTACAACCCATCAGTTATTTAAGTTTTATCAGGCATTTGACACTGTCATTGTCGATG
AGGTTGATGCGTTCCCATTTGTCAATAATCCCCAGCTTGAGATGGCTGTTAAACAGGCGTGTAAGCCATGCTGTGCATTG
ATCTATCTGACGGCGACACCAACTGTAAAGTTGCGCCATGCGATTAATACAGGGGATTTAACGGGTAGTGAGCTACCAAT
TCGCTTTCATGGTCACTTATTACCTGAACCGCATTGCTATCCCTTGTTTACGTGCGGCGTTCAGTTAAACGGCATCAGTT
ACCATCCGTGA

Domains

Predicted by InterproScan.

• Type III restriction enzyme, res subunit (ResIII) (101-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Latilactobacillus sakei subsp. sakei 23K	69.93	96.622	0.676
comFA/cflA	Streptococcus pneumoniae TIGR4	46.667	86.149	0.402
comFA/cflA	Streptococcus pneumoniae Rx1	46.275	86.149	0.399
comFA/cflA	Streptococcus pneumoniae D39	46.275	86.149	0.399
comFA/cflA	Streptococcus pneumoniae R6	46.275	86.149	0.399
comFA/cflA	Streptococcus mitis NCTC 12261	48.536	80.743	0.392
comFA/cflA	Streptococcus mitis SK321	47.28	80.743	0.382