Detailed information
Bioinformatically predicted
Overview
| Name | comE | Type | Machinery gene |
| Locus tag | JLZ01_RS08665 | Genome accession | NZ_AP024155 |
| Coordinates | 1662606..1663001 (-) | Length | 131 a.a. |
| NCBI ID | WP_003703428.1 | Uniprot ID | - |
| Organism | Neisseria gonorrhoeae strain TUM 19855 | ||
| Function | DNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1657606..1668001
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JLZ01_RS08620 (TUM19855C_16640) | - | 1657909..1658154 (-) | 246 | WP_003689849.1 | hypothetical protein | - |
| JLZ01_RS08625 (TUM19855C_16650) | - | 1658266..1658694 (+) | 429 | WP_020997399.1 | CopD family protein | - |
| JLZ01_RS08630 (TUM19855C_16660) | - | 1658706..1659182 (+) | 477 | WP_003689851.1 | CYTH domain-containing protein | - |
| JLZ01_RS08635 (TUM19855C_16670) | - | 1659212..1659700 (-) | 489 | WP_025455834.1 | dihydrofolate reductase | - |
| JLZ01_RS08640 (TUM19855C_16680) | aroG | 1659768..1660823 (-) | 1056 | WP_003689853.1 | 3-deoxy-7-phosphoheptulonate synthase AroG | - |
| JLZ01_RS08645 | - | 1660985..1661212 (-) | 228 | WP_153707886.1 | hypothetical protein | - |
| JLZ01_RS08655 (TUM19855C_16690) | - | 1661440..1661736 (+) | 297 | WP_003689859.1 | hypothetical protein | - |
| JLZ01_RS08660 (TUM19855C_16700) | - | 1661733..1661972 (+) | 240 | WP_012503951.1 | membrane protein | - |
| JLZ01_RS12035 | - | 1662525..1662672 (+) | 148 | Protein_1689 | peptidase | - |
| JLZ01_RS08665 (TUM19855C_16710) | comE | 1662606..1663001 (-) | 396 | WP_003703428.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| JLZ01_RS11775 | - | 1663103..1663222 (-) | 120 | Protein_1691 | competence protein ComE | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 13796.61 Da Isoelectric Point: 10.8790
>NTDB_id=83704 JLZ01_RS08665 WP_003703428.1 1662606..1663001(-) (comE) [Neisseria gonorrhoeae strain TUM 19855]
MSRGGATPYRFLLIRHIVARCGLLFATLKGKTMKKMFVLFCMLFSCAFSLAAVNINAASQQELEALPGIGPAKAKAIAEY
RAQNGAFKSVDDLIKVKGIGPAVLAKLKDQASVGAPAPKGPAKPVLPAVKK
MSRGGATPYRFLLIRHIVARCGLLFATLKGKTMKKMFVLFCMLFSCAFSLAAVNINAASQQELEALPGIGPAKAKAIAEY
RAQNGAFKSVDDLIKVKGIGPAVLAKLKDQASVGAPAPKGPAKPVLPAVKK
Nucleotide
Download Length: 396 bp
>NTDB_id=83704 JLZ01_RS08665 WP_003703428.1 1662606..1663001(-) (comE) [Neisseria gonorrhoeae strain TUM 19855]
TTGAGCCGGGGCGGGGCAACGCCGTACCGGTTTTTGTTAATCCGCCATATCGTCGCAAGATGCGGTTTGTTGTTTGCAAC
CCTTAAAGGAAAAACCATGAAAAAAATGTTTGTATTGTTCTGTATGCTGTTCTCCTGCGCCTTCTCCCTTGCGGCGGTAA
ACATCAATGCGGCTTCGCAGCAGGAGCTGGAGGCGCTGCCGGGCATAGGCCCGGCGAAGGCGAAGGCCATTGCGGAATAC
CGCGCGCAAAACGGCGCGTTCAAGTCTGTGGACGATTTGATCAAGGTGAAGGGCATCGGTCCGGCGGTGCTGGCGAAGCT
GAAAGACCAGGCTTCCGTCGGCGCGCCCGCACCAAAAGGCCCCGCCAAACCGGTGCTGCCTGCGGTTAAAAAATAG
TTGAGCCGGGGCGGGGCAACGCCGTACCGGTTTTTGTTAATCCGCCATATCGTCGCAAGATGCGGTTTGTTGTTTGCAAC
CCTTAAAGGAAAAACCATGAAAAAAATGTTTGTATTGTTCTGTATGCTGTTCTCCTGCGCCTTCTCCCTTGCGGCGGTAA
ACATCAATGCGGCTTCGCAGCAGGAGCTGGAGGCGCTGCCGGGCATAGGCCCGGCGAAGGCGAAGGCCATTGCGGAATAC
CGCGCGCAAAACGGCGCGTTCAAGTCTGTGGACGATTTGATCAAGGTGAAGGGCATCGGTCCGGCGGTGCTGGCGAAGCT
GAAAGACCAGGCTTCCGTCGGCGCGCCCGCACCAAAAGGCCCCGCCAAACCGGTGCTGCCTGCGGTTAAAAAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |
| comE | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |
| comE | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |
| comE | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |