Detailed information NTG0835922

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: QNH41_RS18790
• Genome accession: NZ_CP126100
• Coordinates: 3640454..3641611 (-)
• Length: 385 a.a.
• NCBI ID: WP_024123030.1
• Uniprot ID: A0A9Q6F2U6
• Organism: Bacillus halotolerans strain LN2
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3635454..3646611

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QNH41_RS18760 (QNH41_18760)	-	3635707..3636126 (-)	420	WP_024123026.1	TIGR03826 family flagellar region protein	-
QNH41_RS18765 (QNH41_18765)	comFC	3636200..3636922 (-)	723	WP_127696434.1	phosphoribosyltransferase family protein	Machinery gene
QNH41_RS18770 (QNH41_18770)	-	3636886..3637182 (-)	297	WP_024123028.1	competence protein ComFB	-
QNH41_RS18775 (QNH41_18775)	comFA	3637239..3638633 (-)	1395	WP_106019638.1	ATP-dependent helicase ComFA	Machinery gene
QNH41_RS18780 (QNH41_18780)	-	3638740..3639585 (-)	846	WP_106019639.1	DegV family protein	-
QNH41_RS18785 (QNH41_18785)	degU	3639682..3640371 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
QNH41_RS18790 (QNH41_18790)	degS	3640454..3641611 (-)	1158	WP_024123030.1	two-component sensor histidine kinase DegS	Regulator
QNH41_RS18795 (QNH41_18795)	-	3641828..3642481 (+)	654	WP_283912627.1	YigZ family protein	-
QNH41_RS18800 (QNH41_18800)	-	3642481..3643659 (+)	1179	WP_024123032.1	LCP family protein	-
QNH41_RS18805 (QNH41_18805)	-	3643731..3644807 (-)	1077	WP_151174552.1	MraY family glycosyltransferase	-
QNH41_RS18810 (QNH41_18810)	-	3644951..3646141 (-)	1191	WP_095712901.1	glycosyltransferase family 1 protein	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44871.71 Da
• Isoelectric Point: 6.7798

>NTDB_id=835922 QNH41_RS18790 WP_024123030.1 3640454..3641611(-) (degS) [Bacillus halotolerans strain LN2]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTEDKRLAPQFEVALFRLAQEAVSNALKHSGSEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=835922 QNH41_RS18790 WP_024123030.1 3640454..3641611(-) (degS) [Bacillus halotolerans strain LN2]
ATGAATAAAACAAAGATGGATTCCAAAGTTCTGGACTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
TGAGGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTCGAAGAACTGAAACAAATTAAACAGCAGG
TTTATGAAGTCATCGAGCTTGGTGATAAACTTGAAGTGCAAACCCGCCATGCGCGAAACCGTTTATCCGAGGTCAGCCGC
AATTTTCATAGATTCAGTGAAGAAGAAATCCGCAACGCTTATGAAAAAGCCCATAAGCTGCAAGTAGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAATTGCGCGAACGCCGGGACGATTTGGAACGCAGACTGTTAGGCCTTCAGGAAATCATCGAAC
GCTCAGAATCACTAGTGAGCCAGATTACGGTCGTGCTGAACTATCTGAATCAGGATCTTCGGGAGGTTGGGCTGCTTCTT
GCTGATGCGCAGGCAAAACAGGATTTTGGCTTGAGAATTATTGAAGCGCAGGAAGAAGAGAGAAAAAGAGTCTCGAGAGA
AATTCATGATGGCCCTGCACAAATGCTGGCAAATGTTATGATGAGATCGGAATTAATTGAACGGATTTTCAGAGACCGAG
GCGCTGAAGACGGATTCCAGGAAATCAAAAATCTCCGCCAAAATGTGCGGAATGCTCTTTACGAAGTGAGACGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTGCGGAAATATCTATATACAACCGAAGAATA
TAACGGTAAGGTGAAAATACATTTTCAGTGCATCGGCGATACGGAGGACAAACGACTCGCGCCTCAGTTTGAAGTTGCGC
TCTTCAGACTCGCACAGGAAGCTGTATCCAATGCGTTAAAGCATTCTGGATCTGAAGAAATTACAGTCAAAGTTGAGATT
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGCAAAGGATTTGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTTGGAATGAAAGAAAGAGTAGATTTATTGGAAGGGACCATGACTATAGATTCAAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTTTGA

Domains

Predicted by InterproScan.

• Histidine kinase (HisKA_3) (180-248)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	99.221	100	0.992