Detailed information NTG0835904

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: QNH41_RS13820
• Genome accession: NZ_CP126100
• Coordinates: 2677610..2678227 (-)
• Length: 205 a.a.
• NCBI ID: WP_151175157.1
• Uniprot ID: -
• Organism: Bacillus halotolerans strain LN2
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2672610..2683227

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QNH41_RS13790 (QNH41_13790)	rpsT	2672913..2673179 (+)	267	WP_010335003.1	30S ribosomal protein S20	-
QNH41_RS13795 (QNH41_13795)	holA	2673194..2674237 (-)	1044	WP_283912457.1	DNA polymerase III subunit delta	-
QNH41_RS13800 (QNH41_13800)	-	2674277..2674426 (-)	150	WP_003229985.1	hypothetical protein	-
QNH41_RS13805 (QNH41_13805)	-	2674467..2674601 (+)	135	WP_010335005.1	YqzM family protein	-
QNH41_RS13810 (QNH41_13810)	comEC	2674640..2676970 (-)	2331	WP_283913066.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
QNH41_RS13815 (QNH41_13815)	-	2676974..2677543 (-)	570	WP_010335007.1	ComE operon protein 2	-
QNH41_RS13820 (QNH41_13820)	comEA	2677610..2678227 (-)	618	WP_151175157.1	helix-hairpin-helix domain-containing protein	Machinery gene
QNH41_RS13825 (QNH41_13825)	comER	2678311..2679132 (+)	822	WP_188323142.1	late competence protein ComER	-
QNH41_RS13830 (QNH41_13830)	-	2679197..2679940 (-)	744	WP_106020124.1	class I SAM-dependent methyltransferase	-
QNH41_RS13835 (QNH41_13835)	rsfS	2679937..2680293 (-)	357	WP_024122115.1	ribosome silencing factor	-
QNH41_RS13840 (QNH41_13840)	yqeK	2680311..2680871 (-)	561	WP_095713321.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
QNH41_RS13845 (QNH41_13845)	-	2680861..2681430 (-)	570	WP_010335014.1	nicotinate-nucleotide adenylyltransferase	-
QNH41_RS13850 (QNH41_13850)	yhbY	2681441..2681731 (-)	291	WP_024122118.1	ribosome assembly RNA-binding protein YhbY	-
QNH41_RS13855 (QNH41_13855)	aroE	2681731..2682567 (-)	837	WP_038954228.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 205 a.a.
• Molecular weight: 22045.89 Da
• Isoelectric Point: 4.8695

>NTDB_id=835904 QNH41_RS13820 WP_151175157.1 2677610..2678227(-) (comEA) [Bacillus halotolerans strain LN2]
MNWLNQHKTIIMSVGSAAVLIAVLCLFFFSGNNKEPVKQVVSSEKENEEVKQEATKDKAEENIVIDIKGAVKHPGVYEMH
TGDRVSQAIEKAGGIGEKADETQVNLAELLQDGTVVYIPSKGEEAAQQAAGGAVQSSKGKETLVNINTATLEDLQNISGV
GPSKAEAIIAYREENGRFQTIEDITKVSGIGEKSFEKIKSSITVK

Nucleotide

• Length: 618 bp

>NTDB_id=835904 QNH41_RS13820 WP_151175157.1 2677610..2678227(-) (comEA) [Bacillus halotolerans strain LN2]
TTGAATTGGTTGAATCAACATAAAACGATAATCATGTCAGTTGGCTCTGCTGCTGTTCTCATTGCAGTTCTTTGCCTCTT
TTTTTTCAGCGGAAATAACAAAGAGCCTGTAAAACAAGTTGTATCTAGTGAAAAGGAAAATGAGGAGGTCAAGCAGGAAG
CAACAAAAGACAAAGCGGAAGAAAATATTGTAATCGATATAAAAGGCGCTGTAAAGCATCCCGGCGTTTATGAAATGCAT
ACGGGAGACAGAGTATCGCAGGCTATTGAGAAAGCAGGCGGCATTGGTGAAAAAGCAGATGAAACGCAAGTGAATTTGGC
GGAACTTTTACAGGACGGTACAGTGGTGTATATACCGAGTAAGGGAGAAGAGGCGGCGCAGCAAGCGGCCGGCGGCGCTG
TACAAAGCAGTAAGGGGAAGGAGACATTGGTCAATATCAACACAGCAACATTAGAGGATTTACAAAACATTTCGGGAGTA
GGACCTTCAAAAGCCGAAGCGATTATTGCGTATCGGGAAGAGAACGGGCGTTTCCAGACAATCGAAGATATCACAAAGGT
TTCGGGAATTGGCGAAAAATCTTTTGAAAAAATAAAGTCTTCCATTACAGTAAAGTGA

Domains

Predicted by InterproScan.

• SLBB domain (SLBB) (64-119)

• Helix-hairpin-helix motif (HHH_3) (141-203)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	77.184	100	0.776
comEA	Staphylococcus aureus MW2	37.727	100	0.405
comEA	Staphylococcus aureus N315	37.387	100	0.405
comEA	Streptococcus thermophilus LMD-9	37.264	100	0.385
comEA	Latilactobacillus sakei subsp. sakei 23K	35.78	100	0.38