Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   QNH41_RS06375 Genome accession   NZ_CP126100
Coordinates   1254646..1255302 (+) Length   218 a.a.
NCBI ID   WP_024120921.1    Uniprot ID   A0A9Q4HP90
Organism   Bacillus halotolerans strain LN2     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1249646..1260302
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH41_RS06345 (QNH41_06345) oppF 1250104..1251021 (+) 918 WP_106020545.1 oligopeptide ABC transporter ATP-binding protein OppF -
  QNH41_RS06350 (QNH41_06350) - 1251131..1252348 (+) 1218 WP_254518294.1 MFS transporter -
  QNH41_RS06355 (QNH41_06355) - 1252515..1253093 (+) 579 WP_010333747.1 GNAT family N-acetyltransferase -
  QNH41_RS06360 (QNH41_06360) spx 1253273..1253668 (+) 396 WP_024120919.1 transcriptional regulator Spx -
  QNH41_RS06365 (QNH41_06365) - 1253711..1254367 (-) 657 WP_044156385.1 TerC family protein -
  QNH41_RS06370 (QNH41_06370) - 1254554..1254679 (+) 126 WP_120698858.1 hypothetical protein -
  QNH41_RS06375 (QNH41_06375) mecA 1254646..1255302 (+) 657 WP_024120921.1 adaptor protein MecA Regulator
  QNH41_RS06380 (QNH41_06380) coiA 1255460..1256611 (+) 1152 WP_283912910.1 competence protein CoiA family protein Machinery gene
  QNH41_RS06385 (QNH41_06385) pepF 1256841..1258670 (+) 1830 WP_189269889.1 oligoendopeptidase F -
  QNH41_RS06390 (QNH41_06390) - 1258706..1258873 (-) 168 WP_024120925.1 hypothetical protein -
  QNH41_RS06395 (QNH41_06395) spxH 1259187..1260086 (-) 900 WP_024120926.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25879.69 Da        Isoelectric Point: 4.0810

>NTDB_id=835876 QNH41_RS06375 WP_024120921.1 1254646..1255302(+) (mecA) [Bacillus halotolerans strain LN2]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPASEDLDALLDDFQKEEQEVNQEEKEQKLQFVLRFDDFEDVISLSKLNVNGSKTTLYSFENR
YYLYVDFYNLTDEEVENQLSILLEYASESSISIHRLEEYGKLVVSEHALETIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=835876 QNH41_RS06375 WP_024120921.1 1254646..1255302(+) (mecA) [Bacillus halotolerans strain LN2]
ATGGAAATTGAAAGAATTAACGAGCATACAGTAAAATTTTATATGTCTTATGGAGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATTTGGTATAACCGTGAGCGCAGTGAAGAACTATTCTGGGAAGTTATGGATGAAGTTCATGAGGAAGAGGAAT
TCGCTGTTGAAGGTCCTCTTTGGATTCAAGTTCAGGCACTGGACAAAGGATTAGAAATTATCGTCACCAAAGCCCAGCTT
TCCAAAGACGGACAAAAGCTCGAACTGCCGATTCCTGAGGATAAAAAGCAAGAACCAGCATCTGAGGATCTTGACGCCTT
GCTGGATGATTTTCAAAAAGAAGAGCAAGAAGTCAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTTGTCTTGCGGTTTG
ATGACTTCGAAGATGTAATTTCTCTATCTAAATTAAACGTTAACGGAAGTAAAACGACTTTATATTCGTTTGAGAACCGA
TATTATTTATATGTGGATTTTTACAATTTGACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGTC
TGAATCCTCAATCAGCATACACCGTCTTGAAGAATACGGCAAGCTGGTTGTATCAGAGCACGCTCTTGAAACGATAAAAA
AACACTTTGCATCATAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

96.789

100

0.968