Detailed information NTG0834784

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: QNH35_RS17445
• Genome accession: NZ_CP126081
• Coordinates: 3349024..3350199 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus pumilus strain B2_10
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3344024..3355199

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QNH35_RS17415 (QNH35_17415)	-	3344192..3344611 (-)	420	WP_034660147.1	TIGR03826 family flagellar region protein	-
QNH35_RS17420 (QNH35_17420)	comFC	3344668..3345354 (-)	687	WP_283923976.1	ComF family protein	Machinery gene
QNH35_RS17425 (QNH35_17425)	-	3345351..3345644 (-)	294	WP_106066158.1	late competence development ComFB family protein	-
QNH35_RS17430 (QNH35_17430)	comFA	3345711..3347090 (-)	1380	WP_283923977.1	DEAD/DEAH box helicase	Machinery gene
QNH35_RS17435 (QNH35_17435)	-	3347210..3348052 (-)	843	WP_283923978.1	DegV family protein	-
QNH35_RS17440 (QNH35_17440)	degU	3348270..3348959 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
QNH35_RS17445 (QNH35_17445)	degS	3349024..3350199 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
QNH35_RS17450 (QNH35_17450)	-	3350421..3351089 (+)	669	WP_003212936.1	YigZ family protein	-
QNH35_RS17455 (QNH35_17455)	-	3351074..3352162 (+)	1089	WP_217012105.1	LCP family protein	-
QNH35_RS17460 (QNH35_17460)	-	3352198..3353265 (-)	1068	WP_003212692.1	MraY family glycosyltransferase	-
QNH35_RS17465 (QNH35_17465)	-	3353397..3354587 (-)	1191	WP_238153562.1	glycosyltransferase	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=834784 QNH35_RS17445 WP_003213166.1 3349024..3350199(-) (degS) [Bacillus pumilus strain B2_10]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=834784 QNH35_RS17445 WP_003213166.1 3349024..3350199(-) (degS) [Bacillus pumilus strain B2_10]
ATGACAACACCTAAAATGGATCCGAAATTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGCAAGGA
CGAAGTATTTAGGATAGGCGAACAGTCCCGTCAACAATATGAAAGCCTTGTAGAAGAGCTGAAGCAAATCAAGCAGCAAG
TAAACGAAGTAATTGATTTTGGGGATAAACTAGAAGTCCATACGAGACATGCTAGAAATCGCTTATCTGAGGTCAGCAGA
AATTTTAACAAATTTAGCGAAGAAGAAATACGCGAGGCCTACGAAAAAGCACATAATCTGCAAGTGGAACTCACCATGAT
CCAGCAGCGTGAAAAGCAGCTGAGAGAAAGAAGAGATGATCTAGAAAGACGACTGTTAAGCCTTCAAGACGTCATTGAAC
GCTCTGAAACGCTTGTGAGCCAGATCACAGTTGTTCTCAACTATCTCAATCAGGACTTACGCCAAGTTGGCGTGTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGACTTAGAATTATTGAAGCCCAAGAAGAAGAGCGCAAAAGGGTATCCCGTGA
AATTCATGACGGTCCGGCCCAGATGCTGGCAAACGTAATGATGCGTTCCGAATTAATTGAACGGATTTTCAGAGACCGTG
GGACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTCAGACAGAATGTGCGAAATGCTCTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCAATGGCTTTAGATGATTTGGGTCTCATTCCGACGCTAAGAAAATATTTAAACACAATCGAAGAGTA
TGATGGAAAAACCAAGATCACGTTCCAATGCCTAGGGGATACAGAAAGCGAAAGAATTGCTTCACAATTTGAAGTGGCAC
TGTTTAGACTAGCCCAAGAAGCTGTCACCAATTCACTAAAGCATTCCGAAGCTGAAGAAATCTCTGTAAAAGTAGAAGTG
ACGAAAGACTTTGTCACGTTAATTATCAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTGAAAACAAACAAAAACAA
ATCCTTCGGTTTACTTGGCATGAAAGAACGCGTAGACTTACTGGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTCGCGTGCCATTAACATTGCAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841