Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   R6Z04_RS04590 Genome accession   NZ_CP139440
Coordinates   895278..897092 (+) Length   604 a.a.
NCBI ID   WP_003244082.1    Uniprot ID   P54719
Organism   Bacillus subtilis strain GUCC4     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 890278..902092
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R6Z04_RS04575 (R6Z04_04575) glvR 891095..891859 (+) 765 WP_015649897.1 MurR/RpiR family transcriptional regulator GlvR -
  R6Z04_RS04580 (R6Z04_04580) malP 891874..893457 (+) 1584 WP_003233606.1 PTS maltose transporter subunit IIBC -
  R6Z04_RS04585 (R6Z04_04585) yfiB 893563..895284 (+) 1722 WP_003243936.1 ABC transporter ATP-binding protein -
  R6Z04_RS04590 (R6Z04_04590) rcrQ 895278..897092 (+) 1815 WP_003244082.1 ABC transporter ATP-binding protein Regulator
  R6Z04_RS04595 (R6Z04_04595) catD 897247..897651 (+) 405 WP_003244204.1 DoxX family oxidoreductase CatD -
  R6Z04_RS04600 (R6Z04_04600) catE 897669..898526 (+) 858 WP_003233597.1 catechol 2,3-dioxygenase -
  R6Z04_RS04605 (R6Z04_04605) yfiF 898620..899564 (+) 945 WP_003243004.1 AraC family transcriptional regulator -
  R6Z04_RS04610 (R6Z04_04610) yfiG 899739..901187 (+) 1449 WP_003244331.1 sugar porter family MFS transporter -

Sequence

Protein


Download         Length: 604 a.a.        Molecular weight: 67396.20 Da        Isoelectric Point: 9.7755

>NTDB_id=830428 R6Z04_RS04590 WP_003244082.1 895278..897092(+) (rcrQ) [Bacillus subtilis strain GUCC4]
MLKDIRKPFQYPKLPIDKKEGAKKRAKAKDTKGTLRRIWSYLAERKGLLILVMLMVVISAIFGLLGPFVIGKAIDHFIVG
KTVSGLIPVLLLLLAIYIIQSLSLWFQNYWMITISQGTVFRMRSELFTHLHELPIPFFDKQRHGELMSRVTNDIENVSST
LNTSVIQILSSVITFVGTIAVMLYMSPLLTLITLTIIPVMAASLKWITNRTGKLFKEQQKNLGDLNGYIEESVSGAKVIK
AYSREKQITAEFLEKNAALKTSGFWAQTISGFIPKVMNSLNNLSFTMIAAIGGLFALKGWISIGSIVVFAEYSRQFTRPL
NDLANQFNTMLSAIAGAERVFDVLDEKEEREDEKNAVHQPIQTGSIEFRDVSFGYDKGQQTLKHLQFTVPAGQSIAFVGP
TGAGKTTVTNLLARFYEPNDGKILIDGTDIKTLTRASLRKNMGFVLQDSFLFQGTIRENIRYGRLDASDQEVEAAAKTAN
AHSFIERLPKGYDTVLTQNGSGISQGQKQLISIARAVLADPVLLILDEATSNIDTVTEVNIQEALARLMEGRTSVIIAHR
LNTIQRADQIVVLKNGEMIEKGSHDELIRQKGFYSDLYESQFEK

Nucleotide


Download         Length: 1815 bp        

>NTDB_id=830428 R6Z04_RS04590 WP_003244082.1 895278..897092(+) (rcrQ) [Bacillus subtilis strain GUCC4]
ATGCTAAAAGACATCCGCAAGCCTTTCCAATATCCCAAACTGCCAATTGACAAAAAAGAAGGCGCGAAAAAGCGGGCGAA
AGCAAAGGATACAAAGGGCACACTGAGACGAATCTGGTCTTACTTGGCTGAAAGAAAAGGACTGCTCATACTTGTCATGC
TAATGGTTGTCATCAGCGCCATATTCGGACTCCTTGGTCCCTTTGTGATCGGAAAGGCCATCGACCATTTTATCGTCGGG
AAAACGGTCAGCGGCTTGATTCCTGTTTTGCTTCTTCTGCTCGCTATCTATATCATTCAGTCCCTGTCGCTTTGGTTTCA
AAACTATTGGATGATTACGATCTCGCAGGGCACGGTTTTCAGAATGAGAAGCGAATTGTTCACCCATCTGCATGAGCTGC
CGATTCCATTTTTTGATAAACAGCGGCACGGCGAGCTGATGAGCCGGGTGACGAATGACATCGAAAATGTCAGTTCTACC
TTAAACACGTCAGTCATTCAAATTTTGTCAAGTGTGATCACCTTTGTCGGGACGATTGCGGTGATGCTGTACATGAGCCC
GCTCCTTACTTTGATTACGCTGACCATTATTCCGGTGATGGCAGCGAGCCTGAAATGGATCACCAACCGAACGGGAAAGC
TGTTTAAAGAACAGCAGAAAAACCTTGGTGATCTGAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAA
GCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCA
GACGATTTCCGGGTTTATTCCGAAGGTCATGAACTCTTTGAATAACTTAAGCTTTACAATGATTGCGGCAATCGGCGGTT
TGTTTGCGCTGAAAGGCTGGATCTCGATCGGCTCCATCGTTGTCTTTGCCGAGTATTCAAGACAATTTACACGCCCTTTA
AACGATCTGGCCAACCAGTTTAATACGATGCTGTCCGCAATCGCCGGCGCTGAACGGGTGTTTGACGTGCTTGATGAAAA
AGAAGAGCGCGAGGATGAAAAGAACGCCGTGCATCAGCCCATCCAAACAGGCAGCATTGAATTCCGGGATGTGTCCTTCG
GTTACGATAAAGGGCAGCAGACACTGAAGCATTTACAGTTTACCGTGCCTGCGGGGCAGTCCATCGCGTTTGTAGGACCG
ACGGGGGCGGGGAAGACAACCGTCACTAACCTTCTCGCCCGTTTTTACGAGCCTAACGATGGAAAAATTTTAATCGATGG
TACAGATATTAAAACCCTTACTAGAGCAAGCCTAAGAAAAAACATGGGGTTTGTTCTTCAGGATTCTTTCTTATTTCAGG
GAACGATCAGAGAAAACATTCGCTACGGCAGGCTTGATGCTTCTGATCAGGAAGTCGAAGCCGCTGCAAAAACAGCGAAT
GCCCATAGTTTTATTGAAAGGCTGCCAAAAGGGTATGACACCGTACTGACGCAAAACGGTTCGGGCATCAGTCAAGGGCA
GAAGCAGTTGATTTCTATAGCGAGGGCGGTGCTTGCCGATCCGGTTCTTCTCATTTTGGATGAAGCGACAAGCAACATTG
ATACCGTTACAGAAGTCAACATTCAAGAAGCGCTCGCCCGTTTAATGGAAGGAAGAACAAGCGTCATCATTGCCCACAGG
CTGAACACCATTCAAAGAGCGGACCAGATTGTGGTGCTAAAAAACGGTGAAATGATTGAAAAAGGCAGCCATGACGAGCT
GATTCGGCAAAAAGGATTTTACAGTGACTTATATGAAAGCCAATTTGAGAAATAG

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(382-531)

ABC transporter transmembrane region (ABC_membrane)

(49-320)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P54719

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

39.31

96.026

0.377