Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilO   Type   Machinery gene
Locus tag   OH685_RS01110 Genome accession   NZ_CP125227
Coordinates   212288..213040 (-) Length   250 a.a.
NCBI ID   WP_060464993.1    Uniprot ID   A0A1E2YH36
Organism   Acinetobacter pittii strain SO1     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 207288..218040
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OH685_RS01090 (OH685_01095) aroB 207845..208927 (-) 1083 WP_126645969.1 3-dehydroquinate synthase -
  OH685_RS01095 (OH685_01100) aroK 208956..209525 (-) 570 WP_002116987.1 shikimate kinase AroK -
  OH685_RS01100 (OH685_01105) pilQ 209537..211687 (-) 2151 WP_130119886.1 type IV pilus secretin PilQ family protein Machinery gene
  OH685_RS01105 (OH685_01110) pilP 211750..212277 (-) 528 WP_002116864.1 pilus assembly protein PilP Machinery gene
  OH685_RS01110 (OH685_01115) pilO 212288..213040 (-) 753 WP_060464993.1 type 4a pilus biogenesis protein PilO Machinery gene
  OH685_RS01115 (OH685_01120) pilN 213037..213678 (-) 642 WP_005067080.1 PilN domain-containing protein Machinery gene
  OH685_RS01120 (OH685_01125) pilM 213678..214736 (-) 1059 WP_005067078.1 pilus assembly protein PilM Machinery gene
  OH685_RS01125 (OH685_01130) ponA 214898..217459 (+) 2562 WP_130119888.1 penicillin-binding protein PBP1a -

Sequence

Protein


Download         Length: 250 a.a.        Molecular weight: 28241.10 Da        Isoelectric Point: 4.8782

>NTDB_id=830428 OH685_RS01110 WP_060464993.1 212288..213040(-) (pilO) [Acinetobacter pittii strain SO1]
MSPDELHELSLEQAPSKKKKITLEKFLQQFNTLDMNSYGSWPLSVKITCWIFIFFAVLALGYFVAIQPKLQAIDNAQAQE
SNLLNEFREKDSKLRNLQQYQLQLQEMQANFNQQLEQLPKETEIPSLVEDINLTGVNSGLKFKNIRLEDEVKQEIFIEQP
ITIEATGDYHAFGAFVSSIAALPRIVTMHDFIVEAAPVKDGKSDIPVLNYSIKAKTYRYMGAVENPEHQEKNASASSVAP
DSSTANTQPK

Nucleotide


Download         Length: 753 bp        

>NTDB_id=830428 OH685_RS01110 WP_060464993.1 212288..213040(-) (pilO) [Acinetobacter pittii strain SO1]
ATGAGTCCTGATGAACTTCATGAGCTGTCTTTAGAACAAGCTCCATCTAAGAAAAAAAAGATCACCTTAGAAAAATTTCT
TCAGCAATTTAACACGCTCGACATGAACAGTTATGGTAGCTGGCCATTATCTGTGAAAATTACGTGTTGGATTTTTATTT
TCTTTGCTGTATTGGCTTTGGGGTATTTTGTTGCTATTCAGCCAAAGCTACAAGCAATTGATAATGCTCAAGCACAAGAA
AGTAATTTATTAAATGAGTTTCGAGAAAAAGACTCAAAATTACGCAACTTGCAGCAATACCAGCTTCAACTTCAAGAGAT
GCAAGCCAACTTCAATCAGCAGTTAGAACAATTGCCAAAAGAAACTGAAATTCCAAGTTTAGTTGAAGATATTAACTTAA
CGGGGGTGAATTCTGGTCTGAAGTTTAAAAATATCCGCTTAGAAGATGAAGTGAAGCAGGAAATTTTTATTGAACAGCCT
ATTACTATCGAAGCAACTGGGGATTATCACGCTTTCGGTGCTTTTGTTAGCAGTATTGCGGCATTACCACGTATTGTGAC
GATGCATGATTTTATTGTTGAAGCTGCTCCTGTTAAGGATGGTAAATCAGATATTCCTGTGCTTAATTATTCTATCAAAG
CAAAAACTTATCGCTATATGGGTGCTGTAGAAAATCCTGAACATCAGGAAAAAAATGCTTCGGCTTCCTCGGTAGCACCT
GATTCTTCTACTGCTAACACACAGCCGAAATAG

Domains

Predicted by InterproScan.

Pilus assembly protein, PilO (PilO)

(73-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1E2YH36

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilO Acinetobacter baumannii D1279779

83.6

100

0.836
  comO Acinetobacter baylyi ADP1

69.583

96

0.668