Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   QLQ51_RS03350 Genome accession   NZ_CP124953
Coordinates   666975..667613 (+) Length   212 a.a.
NCBI ID   WP_302532564.1    Uniprot ID   -
Organism   Enterococcus faecalis strain EfsC23     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 661975..672613
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QLQ51_RS03330 (QLQ51_03325) - 662355..663146 (+) 792 WP_002355660.1 alpha/beta hydrolase family protein -
  QLQ51_RS03335 (QLQ51_03330) - 663227..663889 (-) 663 WP_002364773.1 TetR/AcrR family transcriptional regulator -
  QLQ51_RS03340 (QLQ51_03335) erfC 664143..665858 (+) 1716 WP_002364772.1 multidrug ABC transporter ATP-binding protein/permease ErfC -
  QLQ51_RS03345 (QLQ51_03340) - 665858..666692 (+) 835 Protein_636 ABC transporter ATP-binding protein -
  QLQ51_RS03350 (QLQ51_03345) rcrQ 666975..667613 (+) 639 WP_302532564.1 ABC transporter ATP-binding protein Regulator
  QLQ51_RS03355 (QLQ51_03350) - 668023..668628 (+) 606 WP_002355664.1 TetR/AcrR family transcriptional regulator -
  QLQ51_RS03360 (QLQ51_03355) - 668767..669846 (+) 1080 WP_002355665.1 ABC transporter permease -
  QLQ51_RS03365 (QLQ51_03360) - 669851..670519 (+) 669 WP_002363221.1 ABC transporter ATP-binding protein -
  QLQ51_RS03370 (QLQ51_03365) - 670577..671140 (-) 564 WP_002355667.1 class I SAM-dependent methyltransferase -
  QLQ51_RS03375 (QLQ51_03370) - 671140..672108 (-) 969 WP_002355668.1 TIGR01212 family radical SAM protein -

Sequence

Protein


Download         Length: 212 a.a.        Molecular weight: 23674.67 Da        Isoelectric Point: 4.2860

>NTDB_id=829716 QLQ51_RS03350 WP_302532564.1 666975..667613(+) (rcrQ) [Enterococcus faecalis strain EfsC23]
MVALVGPTGSGKTTIMNLMNRFYDVNEGAVTFDGVDIREMDLDSLRSHVGIVLQESVLFSGTIRENIAFGKPEATDEEIV
QAAKQANIHEFIVNLEQGYDTEITEENNLFSTGQKQLVSIARTIITNPELLILDEATSNVDTVTEAKIQKAMDEAIKGRT
SFVIAHRLKTILNADRIIVLRDGEVIEEGNHHELVEQDGFYAELYKNQFVFE

Nucleotide


Download         Length: 639 bp        

>NTDB_id=829716 QLQ51_RS03350 WP_302532564.1 666975..667613(+) (rcrQ) [Enterococcus faecalis strain EfsC23]
ATGGTCGCTTTAGTCGGACCGACAGGCTCAGGAAAAACAACGATTATGAATTTAATGAATCGCTTTTATGATGTGAATGA
AGGCGCCGTAACGTTTGATGGTGTGGACATTCGTGAAATGGATTTAGATAGCTTGCGTTCACATGTAGGCATTGTTTTGC
AAGAGTCCGTTCTATTTTCAGGAACAATTCGTGAGAATATTGCTTTTGGTAAGCCAGAGGCCACGGATGAAGAAATTGTT
CAAGCAGCGAAACAAGCGAATATCCATGAATTTATTGTAAATCTTGAGCAAGGCTACGATACTGAGATTACGGAAGAGAA
TAACCTTTTCAGTACGGGACAAAAGCAATTAGTAAGTATTGCACGAACGATTATTACCAATCCAGAATTATTAATTTTGG
ATGAAGCAACAAGTAATGTTGATACAGTAACAGAAGCCAAAATCCAAAAAGCGATGGACGAAGCAATTAAAGGGCGCACC
AGTTTTGTGATTGCCCATCGTTTGAAAACGATTCTAAACGCGGATCGGATTATTGTTTTACGAGACGGTGAAGTCATTGA
AGAAGGCAACCACCATGAACTAGTTGAACAAGATGGATTCTATGCGGAACTTTATAAAAATCAATTTGTTTTTGAATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(2-138)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

51.923

98.113

0.509
  rcrP Streptococcus mutans UA159

39.81

99.528

0.396
  comA Streptococcus mitis SK321

39.614

97.642

0.387
  comA Streptococcus mitis NCTC 12261

39.614

97.642

0.387
  comA Streptococcus pneumoniae Rx1

40

96.698

0.387
  comA Streptococcus pneumoniae D39

40

96.698

0.387
  comA Streptococcus pneumoniae R6

40

96.698

0.387
  comA/nlmT Streptococcus mutans UA159

39.512

96.698

0.382
  comA Streptococcus pneumoniae TIGR4

39.512

96.698

0.382