Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   R8611_RS08635 Genome accession   NZ_AP026927
Coordinates   1711984..1712694 (+) Length   236 a.a.
NCBI ID   WP_000760673.1    Uniprot ID   A0A0H2URH4
Organism   Streptococcus pneumoniae strain PZ900700178     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1706984..1717694
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R8611_RS08620 (PC0174_17100) - 1707525..1707773 (-) 249 WP_317648070.1 YneF family protein -
  R8611_RS08625 (PC0174_17110) treC 1708029..1709654 (-) 1626 WP_317647915.1 alpha,alpha-phosphotrehalase -
  R8611_RS08630 (PC0174_17120) treP 1709832..1711799 (-) 1968 WP_050245235.1 PTS system trehalose-specific EIIBC component -
  R8611_RS08635 (PC0174_17130) treR 1711984..1712694 (+) 711 WP_000760673.1 trehalose operon repressor Regulator
  R8611_RS08640 - 1712849..1714175 (+) 1327 Protein_1717 transposase -
  R8611_RS08645 (PC0174_17160) - 1714250..1715176 (-) 927 WP_001291294.1 ATP-binding cassette domain-containing protein -
  R8611_RS08650 (PC0174_17170) amiE 1715187..1716254 (-) 1068 WP_000159554.1 ABC transporter ATP-binding protein Regulator
  R8611_RS08655 (PC0174_17180) amiD 1716263..1717189 (-) 927 WP_044812043.1 oligopeptide ABC transporter permease OppC Regulator

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 27607.78 Da        Isoelectric Point: 8.9698

>NTDB_id=82954 R8611_RS08635 WP_000760673.1 1711984..1712694(+) (treR) [Streptococcus pneumoniae strain PZ900700178]
MKKYQQLFKQIQETIQNETYAVGDFLPSEHDLMEQYQVSRDTVRKALSLLQEEGLIKKIRGQGSQVVKEETVNFPVSNLT
SYQELVKELGLRSKTNVVSLDKIIIDKKSSLITGFPEFRMVWKVVRQRVVDDLVSVLDTDYLDMELIPNLTRQIAEQSIY
SYIENGLKLLIDYAQKEITIDHSSDRDKILMDIGKDPYVVSIKSKVYLQDGRQFQFTESRHKLEKFRFVDFAKRKK

Nucleotide


Download         Length: 711 bp        

>NTDB_id=82954 R8611_RS08635 WP_000760673.1 1711984..1712694(+) (treR) [Streptococcus pneumoniae strain PZ900700178]
ATGAAGAAATACCAACAATTATTTAAGCAAATCCAAGAAACCATTCAAAACGAGACTTACGCTGTCGGAGATTTCCTTCC
TAGCGAGCACGACCTTATGGAGCAATATCAAGTGAGTCGTGATACCGTCCGAAAGGCCCTGTCTCTCCTCCAAGAGGAAG
GATTGATCAAAAAGATAAGAGGGCAAGGTTCTCAAGTCGTCAAAGAAGAAACCGTCAATTTCCCTGTATCCAACCTAACC
AGCTACCAAGAACTAGTTAAAGAACTTGGACTGCGCTCTAAAACCAACGTGGTCAGTCTGGACAAGATTATTATTGATAA
AAAATCCTCACTGATAACCGGTTTCCCAGAGTTTCGGATGGTTTGGAAGGTGGTCCGCCAGCGTGTGGTGGATGATCTGG
TATCCGTTCTGGATACAGACTATCTGGATATGGAACTAATTCCAAATCTCACTCGCCAAATTGCTGAGCAGTCTATCTAT
TCTTATATAGAAAATGGCCTCAAACTCCTTATTGATTATGCTCAGAAGGAAATCACCATTGACCACTCAAGCGACCGAGA
CAAGATTCTCATGGACATTGGCAAAGACCCTTATGTCGTTTCGATTAAATCAAAAGTCTATCTCCAAGACGGACGCCAAT
TTCAGTTTACCGAAAGTCGCCATAAGTTAGAAAAATTTAGATTTGTAGATTTTGCAAAACGCAAGAAATAA

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(89-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2URH4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

59.322

100

0.593

Multiple sequence alignment